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Robbie1977Robbie1977
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fix: correct JSON formatting in README and update example data for term info
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Lines changed: 46 additions & 48 deletions

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‎README.md‎

Lines changed: 46 additions & 48 deletions
Original file line numberDiff line numberDiff line change
@@ -17,6 +17,7 @@ Class example:
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vfb.get_term_info('FBbt_00003748')
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```
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```json
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``json
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{
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"Name": "medulla",
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"Id": "FBbt_00003748",
@@ -124,31 +125,8 @@ vfb.get_term_info('FBbt_00003748')
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}
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],
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"IsIndividual": False,
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"Images": {},
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"IsClass": True,
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"Examples": {
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"VFB_00030786": [
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{
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"id": "VFB_00030810",
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"label": "medulla on adult brain template Ito2014",
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"thumbnail": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/thumbnail.png",
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"thumbnail_transparent": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/thumbnailT.png",
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"nrrd": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/volume.nrrd",
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"wlz": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/volume.wlz",
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"obj": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/volume_man.obj"
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}
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],
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"VFB_00101567": [
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{
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"id": "VFB_00102107",
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"label": "ME on JRC2018Unisex adult brain",
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"thumbnail": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/thumbnail.png",
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"thumbnail_transparent": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/thumbnailT.png",
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"nrrd": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/volume.nrrd",
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"wlz": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/volume.wlz",
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"obj": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/volume_man.obj"
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}
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],
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"VFB_00017894": [
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{
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"id": "VFB_00030624",
@@ -170,25 +148,38 @@ vfb.get_term_info('FBbt_00003748')
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"wlz": "https://www.virtualflybrain.org/data/VFB/i/0010/1385/VFB_00101384/volume.wlz",
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"obj": "https://www.virtualflybrain.org/data/VFB/i/0010/1385/VFB_00101384/volume_man.obj"
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}
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],
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"VFB_00101567": [
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{
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"id": "VFB_00102107",
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"label": "ME on JRC2018Unisex adult brain",
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"thumbnail": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/thumbnail.png",
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"thumbnail_transparent": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/thumbnailT.png",
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"nrrd": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/volume.nrrd",
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"wlz": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/volume.wlz",
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"obj": "https://www.virtualflybrain.org/data/VFB/i/0010/2107/VFB_00101567/volume_man.obj"
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}
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],
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"VFB_00030786": [
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{
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"id": "VFB_00030810",
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"label": "medulla on adult brain template Ito2014",
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"thumbnail": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/thumbnail.png",
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"thumbnail_transparent": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/thumbnailT.png",
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"nrrd": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/volume.nrrd",
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"wlz": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/volume.wlz",
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"obj": "https://www.virtualflybrain.org/data/VFB/i/0003/0810/VFB_00030786/volume_man.obj"
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}
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]
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},
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"IsTemplate": False,
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"Domains": {},
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"Licenses": {},
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"Publications": [],
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"Synonyms": [
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{
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"label": "ME",
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"scope": "has_exact_synonym",
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"type": "",
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"publication": "[Ito et al., 2014](FBrf0224194)"
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},
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{
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"label": "m",
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"scope": "has_related_synonym",
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"type": "",
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"publication": ""
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},
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{
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"label": "Med",
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"scope": "has_exact_synonym",
@@ -200,6 +191,12 @@ vfb.get_term_info('FBbt_00003748')
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"scope": "has_exact_synonym",
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"type": "",
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"publication": "[Venkatesh and Shyamala, 2010](FBrf0212889)"
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},
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{
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"label": "m",
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"scope": "has_related_synonym",
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"type": "",
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"publication": ""
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}
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]
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}
@@ -210,6 +207,7 @@ Individual example:
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vfb.get_term_info('VFB_00000001')
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```
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```json
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```json
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{
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"Name": "fru-M-200266",
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"Id": "VFB_00000001",
@@ -307,28 +305,28 @@ vfb.get_term_info('VFB_00000001')
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"score": "0.61",
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"name": "[fru-M-000204](VFB_00000333)",
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"tags": "Expression_pattern_fragment|Neuron|Adult|lineage_CM3",
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"thumbnail": "[![fru-M-000204 aligned to JFRC2](http://www.virtualflybrain.org/data/VFB/i/0000/0333/VFB_00017894/thumbnail.png 'fru-M-000204 aligned to JFRC2')](VFB_00017894,VFB_00000333)"
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"thumbnail": "[![fru-M-000204 aligned to JRC2018U](http://www.virtualflybrain.org/data/VFB/i/0000/0333/VFB_00101567/thumbnail.png 'fru-M-000204 aligned to JRC2018U')](VFB_00101567,VFB_00000333)"
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},
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{
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"id": "VFB_00000333",
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"score": "0.61",
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"name": "[fru-M-000204](VFB_00000333)",
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"tags": "Expression_pattern_fragment|Neuron|Adult|lineage_CM3",
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"thumbnail": "[![fru-M-000204 aligned to JRC2018U](http://www.virtualflybrain.org/data/VFB/i/0000/0333/VFB_00101567/thumbnail.png 'fru-M-000204 aligned to JRC2018U')](VFB_00101567,VFB_00000333)"
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"thumbnail": "[![fru-M-000204 aligned to JFRC2](http://www.virtualflybrain.org/data/VFB/i/0000/0333/VFB_00017894/thumbnail.png 'fru-M-000204 aligned to JFRC2')](VFB_00017894,VFB_00000333)"
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},
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{
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"id": "VFB_00002439",
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"score": "0.6",
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"name": "[fru-M-900020](VFB_00002439)",
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"tags": "Expression_pattern_fragment|Neuron|Adult|lineage_CM3",
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"thumbnail": "[![fru-M-900020 aligned to JFRC2](http://www.virtualflybrain.org/data/VFB/i/0000/2439/VFB_00017894/thumbnail.png 'fru-M-900020 aligned to JFRC2')](VFB_00017894,VFB_00002439)"
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"thumbnail": "[![fru-M-900020 aligned to JRC2018U](http://www.virtualflybrain.org/data/VFB/i/0000/2439/VFB_00101567/thumbnail.png 'fru-M-900020 aligned to JRC2018U')](VFB_00101567,VFB_00002439)"
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},
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{
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"id": "VFB_00002439",
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"score": "0.6",
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"name": "[fru-M-900020](VFB_00002439)",
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"tags": "Expression_pattern_fragment|Neuron|Adult|lineage_CM3",
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"thumbnail": "[![fru-M-900020 aligned to JRC2018U](http://www.virtualflybrain.org/data/VFB/i/0000/2439/VFB_00101567/thumbnail.png 'fru-M-900020 aligned to JRC2018U')](VFB_00101567,VFB_00002439)"
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"thumbnail": "[![fru-M-900020 aligned to JFRC2](http://www.virtualflybrain.org/data/VFB/i/0000/2439/VFB_00017894/thumbnail.png 'fru-M-900020 aligned to JFRC2')](VFB_00017894,VFB_00002439)"
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},
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{
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"id": "VFB_00001880",
@@ -345,18 +343,6 @@ vfb.get_term_info('VFB_00000001')
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],
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"IsIndividual": True,
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"Images": {
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"VFB_00017894": [
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{
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"id": "VFB_00000001",
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"label": "fru-M-200266",
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"thumbnail": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/thumbnail.png",
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"thumbnail_transparent": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/thumbnailT.png",
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"nrrd": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/volume.nrrd",
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"wlz": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/volume.wlz",
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"obj": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/volume.obj",
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"swc": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/volume.swc"
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}
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],
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"VFB_00101567": [
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{
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"id": "VFB_00000001",
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"obj": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00101567/volume.obj",
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"swc": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00101567/volume.swc"
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}
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],
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"VFB_00017894": [
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{
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"id": "VFB_00000001",
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"label": "fru-M-200266",
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"thumbnail": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/thumbnail.png",
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"thumbnail_transparent": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/thumbnailT.png",
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"nrrd": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/volume.nrrd",
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"wlz": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/volume.wlz",
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"obj": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/volume.obj",
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"swc": "https://www.virtualflybrain.org/data/VFB/i/0000/0001/VFB_00017894/volume.swc"
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}
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]
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},
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"IsClass": False,

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