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Update performance test results [skip ci]
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performance.md

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# VFBquery Performance Test Results
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**Test Date:** 2026-04-26 04:55:11 UTC
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**Git Commit:** 863a104a722fe59920f329d8defd9eda5fbba97a
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**Test Date:** 2026-04-27 05:18:20 UTC
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**Git Commit:** 52835680c8158f2ce1c69c1cc1287b98ea6f5245
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**Branch:** main
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**Workflow Run:** [24948608319](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/24948608319)
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**Workflow Run:** [24977827140](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/24977827140)
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## Test Overview
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@@ -116,7 +116,7 @@ test_14_publication_transgene_queries (src.test.test_query_performance.QueryPerf
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Test publication and transgene queries ... ok
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----------------------------------------------------------------------
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Ran 15 tests in 70.614s
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Ran 15 tests in 62.901s
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OK
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VFBquery functions patched with caching support
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================================================================================
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TERM INFO QUERIES
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================================================================================
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get_term_info (mushroom body): 2.7227s
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get_term_info (individual): 2.5748s
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get_term_info (mushroom body): 2.1926s
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get_term_info (individual): 1.7179s
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================================================================================
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NEURON PART OVERLAP QUERIES
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================================================================================
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NeuronsPartHere: 2.8848s
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NeuronsPartHere: 2.0128s
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================================================================================
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SYNAPTIC TERMINAL QUERIES
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================================================================================
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NeuronsSynaptic: 2.5544s
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NeuronsPresynapticHere: 2.5466s
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NeuronsPostsynapticHere: 1.7490s
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NeuronNeuronConnectivity: 1.8496s
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NeuronsSynaptic: 1.7981s
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NeuronsPresynapticHere: 1.5078s
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NeuronsPostsynapticHere: 1.6880s
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NeuronNeuronConnectivity: 1.4332s
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================================================================================
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ANATOMICAL HIERARCHY QUERIES
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================================================================================
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ComponentsOf: 2.0095s
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PartsOf: 1.4994s
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SubclassesOf: 1.4970s
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ComponentsOf: 1.3764s
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PartsOf: 1.3919s
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SubclassesOf: 1.4462s
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================================================================================
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TRACT/NERVE AND LINEAGE QUERIES
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================================================================================
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NeuronClassesFasciculatingHere: 1.4771s
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TractsNervesInnervatingHere: 1.4961s
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LineageClonesIn: 1.6787s
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NeuronClassesFasciculatingHere: 1.3680s
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TractsNervesInnervatingHere: 1.3861s
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LineageClonesIn: 1.3756s
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================================================================================
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IMAGE AND DEVELOPMENTAL QUERIES
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================================================================================
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ImagesNeurons: 2.5813s
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ImagesThatDevelopFrom: 1.4785s
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epFrag: 1.3964s
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ImagesNeurons: 2.5037s
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ImagesThatDevelopFrom: 1.4238s
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epFrag: 1.3793s
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================================================================================
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INSTANCE QUERIES
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================================================================================
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ListAllAvailableImages: 1.4561s
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ListAllAvailableImages: 1.3771s
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================================================================================
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CONNECTIVITY QUERIES
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NeuronNeuronConnectivityQuery: 1.3889s
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NeuronRegionConnectivityQuery: 1.3758s
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NeuronNeuronConnectivityQuery: 1.3953s
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NeuronRegionConnectivityQuery: 1.3827s
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================================================================================
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SIMILARITY QUERIES (Neo4j NBLAST)
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SimilarMorphologyTo: 0.8298s
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SimilarMorphologyTo: 0.7342s
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================================================================================
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NEURON INPUT QUERIES (Neo4j)
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NeuronInputsTo: 2.7759s
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NeuronInputsTo: 3.6817s
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================================================================================
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EXPRESSION PATTERN QUERIES (Neo4j)
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ExpressionOverlapsHere: 1.1326s
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ExpressionOverlapsHere: 1.0360s
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└─ Found 3922 total expression patterns, returned 10
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================================================================================
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TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
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anatScRNAseqQuery: 0.7159s
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anatScRNAseqQuery: 0.6847s
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└─ Found 57 total clusters, returned 10
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clusterExpression: 1.2179s
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clusterExpression: 0.9862s
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└─ Found 4588 genes expressed, returned 10
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expressionCluster: 0.7698s
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expressionCluster: 0.8024s
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└─ Found 9 clusters expressing gene
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scRNAdatasetData: 0.6767s
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scRNAdatasetData: 0.7985s
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└─ Found 13 clusters in dataset, returned 10
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================================================================================
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NBLAST SIMILARITY QUERIES
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SimilarMorphologyTo: 0.7871s
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SimilarMorphologyTo: 1.0530s
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└─ Found 215 NBLAST matches, returned 10
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SimilarMorphologyToPartOf: 0.6061s
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SimilarMorphologyToPartOf: 0.5644s
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└─ Found 0 NBLASTexp matches
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SimilarMorphologyToPartOfexp: 0.6012s
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SimilarMorphologyToPartOfexp: 0.6903s
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└─ Found 0 reverse NBLASTexp matches
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SimilarMorphologyToNB: 0.6894s
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SimilarMorphologyToNB: 0.5934s
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└─ Found 15 NeuronBridge matches, returned 10
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SimilarMorphologyToNBexp: 0.6485s
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SimilarMorphologyToNBexp: 0.5983s
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└─ Found 15 NeuronBridge expression matches, returned 10
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✅ All NBLAST similarity queries completed
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DATASET/TEMPLATE QUERIES
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PaintedDomains: 0.7282s
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PaintedDomains: 0.7214s
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└─ Found 46 painted domains, returned 10
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DatasetImages: 0.6731s
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DatasetImages: 0.6326s
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└─ Found 46 images in dataset, returned 10
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AllAlignedImages: 2.4451s
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AllAlignedImages: 2.5845s
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└─ Found 527179 aligned images, returned 10
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AlignedDatasets: 0.6913s
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AlignedDatasets: 0.7115s
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└─ Found 72 aligned datasets, returned 10
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AllDatasets: 0.7785s
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AllDatasets: 0.7820s
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└─ Found 130 total datasets, returned 20
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✅ All dataset/template queries completed
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================================================================================
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PUBLICATION/TRANSGENE QUERIES
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TermsForPub: 0.7162s
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TermsForPub: 0.7944s
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└─ Found 2 terms for publication
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TransgeneExpressionHere: 3.0384s
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TransgeneExpressionHere: 1.4529s
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└─ Found 2340 transgene expressions, returned 10
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✅ All publication/transgene queries completed
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Performance test for specific term info queries. ... ok
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----------------------------------------------------------------------
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Ran 1 test in 2.946s
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Ran 1 test in 2.918s
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OK
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VFBquery functions patched with caching support
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==================================================
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Performance Test Results:
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==================================================
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FBbt_00003748 query took: 1.5049 seconds
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VFB_00101567 query took: 1.4412 seconds
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Total time for both queries: 2.9461 seconds
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FBbt_00003748 query took: 1.4376 seconds
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VFB_00101567 query took: 1.4797 seconds
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Total time for both queries: 2.9173 seconds
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Performance Level: 🟡 Good (1.5-3 seconds)
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==================================================
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Performance test completed successfully!
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- [GitHub Actions History](https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml)
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*Last updated: 2026-04-26 04:55:11 UTC*
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*Last updated: 2026-04-27 05:18:20 UTC*

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