Skip to content

Commit e1611ab

Browse files
committed
Update performance test results [skip ci]
1 parent 8b105f4 commit e1611ab

1 file changed

Lines changed: 54 additions & 54 deletions

File tree

performance.md

Lines changed: 54 additions & 54 deletions
Original file line numberDiff line numberDiff line change
@@ -1,9 +1,9 @@
11
# VFBquery Performance Test Results
22

3-
**Test Date:** 2026-02-04 11:37:48 UTC
4-
**Git Commit:** 86cf4bcdaf86394d96ee813859d4a1df4a2a2465
3+
**Test Date:** 2026-02-04 11:52:48 UTC
4+
**Git Commit:** 8b105f408f45c0a2d0c518fff2dbf897c0ec334f
55
**Branch:** main
6-
**Workflow Run:** [21669905617](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/21669905617)
6+
**Workflow Run:** [21670339109](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/21670339109)
77

88
## Test Overview
99

@@ -116,7 +116,7 @@ test_14_publication_transgene_queries (src.test.test_query_performance.QueryPerf
116116
Test publication and transgene queries ... ok
117117
118118
----------------------------------------------------------------------
119-
Ran 15 tests in 60.838s
119+
Ran 15 tests in 64.286s
120120
121121
OK
122122
VFBquery functions patched with caching support
@@ -128,118 +128,118 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
128128
================================================================================
129129
TERM INFO QUERIES
130130
================================================================================
131-
get_term_info (mushroom body): 1.9360s
132-
get_term_info (individual): 1.7359s
131+
get_term_info (mushroom body): 1.9645s
132+
get_term_info (individual): 1.5726s
133133
134134
================================================================================
135135
NEURON PART OVERLAP QUERIES
136136
================================================================================
137-
NeuronsPartHere: 1.9209s
137+
NeuronsPartHere: 2.0742s
138138
139139
================================================================================
140140
SYNAPTIC TERMINAL QUERIES
141141
================================================================================
142-
NeuronsSynaptic: 1.9275s
143-
NeuronsPresynapticHere: 1.6546s
144-
NeuronsPostsynapticHere: 1.6173s
145-
NeuronNeuronConnectivity: 1.4120s
142+
NeuronsSynaptic: 1.6343s
143+
NeuronsPresynapticHere: 1.7605s
144+
NeuronsPostsynapticHere: 1.6514s
145+
NeuronNeuronConnectivity: 1.3420s
146146
147147
================================================================================
148148
ANATOMICAL HIERARCHY QUERIES
149149
================================================================================
150-
ComponentsOf: 1.3883s
151-
PartsOf: 1.3828s
152-
SubclassesOf: 1.3963s
150+
ComponentsOf: 1.4033s
151+
PartsOf: 1.1692s
152+
SubclassesOf: 1.8569s
153153
154154
================================================================================
155155
TRACT/NERVE AND LINEAGE QUERIES
156156
================================================================================
157-
NeuronClassesFasciculatingHere: 1.5019s
158-
TractsNervesInnervatingHere: 1.3931s
159-
LineageClonesIn: 1.3967s
157+
NeuronClassesFasciculatingHere: 1.1820s
158+
TractsNervesInnervatingHere: 1.4192s
159+
LineageClonesIn: 1.2184s
160160
161161
================================================================================
162162
IMAGE AND DEVELOPMENTAL QUERIES
163163
================================================================================
164-
ImagesNeurons: 2.3912s
165-
ImagesThatDevelopFrom: 1.4619s
166-
epFrag: 1.4099s
164+
ImagesNeurons: 2.4185s
165+
ImagesThatDevelopFrom: 1.2455s
166+
epFrag: 1.2641s
167167
168168
================================================================================
169169
INSTANCE QUERIES
170170
================================================================================
171-
ListAllAvailableImages: 1.4019s
171+
ListAllAvailableImages: 1.1833s
172172
173173
================================================================================
174174
CONNECTIVITY QUERIES
175175
================================================================================
176-
NeuronNeuronConnectivityQuery: 1.3977s
177-
NeuronRegionConnectivityQuery: 1.3976s
176+
NeuronNeuronConnectivityQuery: 1.1753s
177+
NeuronRegionConnectivityQuery: 1.1746s
178178
179179
================================================================================
180180
SIMILARITY QUERIES (Neo4j NBLAST)
181181
================================================================================
182-
SimilarMorphologyTo: 0.7424s
182+
SimilarMorphologyTo: 0.7004s
183183
184184
================================================================================
185185
NEURON INPUT QUERIES (Neo4j)
186186
================================================================================
187-
NeuronInputsTo: 2.8306s
187+
NeuronInputsTo: 2.7290s
188188
189189
================================================================================
190190
EXPRESSION PATTERN QUERIES (Neo4j)
191191
================================================================================
192-
ExpressionOverlapsHere: 1.0273s
192+
ExpressionOverlapsHere: 0.8909s
193193
└─ Found 3922 total expression patterns, returned 10
194194
195195
================================================================================
196196
TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
197197
================================================================================
198-
anatScRNAseqQuery: 0.6945s
198+
anatScRNAseqQuery: 0.5957s
199199
└─ Found 0 total clusters
200-
clusterExpression: 0.6877s
200+
clusterExpression: 0.6691s
201201
└─ Found 0 genes expressed
202-
expressionCluster: 0.6807s
203-
└─ Found 0 clusters expressing gene
204-
scRNAdatasetData: 0.6953s
202+
expressionCluster: 0.6941s
203+
└─ Found 9 clusters expressing gene
204+
scRNAdatasetData: 0.5846s
205205
└─ Found 0 clusters in dataset
206206
207207
================================================================================
208208
NBLAST SIMILARITY QUERIES
209209
================================================================================
210-
SimilarMorphologyTo: 1.5180s
210+
SimilarMorphologyTo: 0.8251s
211211
└─ Found 215 NBLAST matches, returned 10
212-
SimilarMorphologyToPartOf: 0.5647s
212+
SimilarMorphologyToPartOf: 0.6521s
213213
└─ Found 0 NBLASTexp matches
214-
SimilarMorphologyToPartOfexp: 0.6548s
214+
SimilarMorphologyToPartOfexp: 0.5714s
215215
└─ Found 0 reverse NBLASTexp matches
216-
SimilarMorphologyToNB: 0.6688s
216+
SimilarMorphologyToNB: 0.5606s
217217
└─ Found 15 NeuronBridge matches, returned 10
218-
SimilarMorphologyToNBexp: 0.6943s
218+
SimilarMorphologyToNBexp: 0.4788s
219219
└─ Found 15 NeuronBridge expression matches, returned 10
220220
✅ All NBLAST similarity queries completed
221221
222222
================================================================================
223223
DATASET/TEMPLATE QUERIES
224224
================================================================================
225-
PaintedDomains: 1.2873s
226-
└─ Found 0 painted domains
227-
DatasetImages: 0.6786s
228-
└─ Found 0 images in dataset
229-
AllAlignedImages: 0.5746s
230-
└─ Found 0 aligned images
231-
AlignedDatasets: 1.4466s
232-
└─ Found 0 aligned datasets
233-
AllDatasets: 0.8414s
225+
PaintedDomains: 1.9671s
226+
└─ Found 46 painted domains, returned 10
227+
DatasetImages: 0.4731s
228+
└─ Found 46 images in dataset, returned 10
229+
AllAlignedImages: 2.0337s
230+
└─ Found 378914 aligned images, returned 10
231+
AlignedDatasets: 2.1349s
232+
└─ Found 72 aligned datasets, returned 10
233+
AllDatasets: 0.6835s
234234
└─ Found 116 total datasets, returned 20
235235
✅ All dataset/template queries completed
236236
237237
================================================================================
238238
PUBLICATION/TRANSGENE QUERIES
239239
================================================================================
240-
TermsForPub: 0.7029s
241-
└─ Found 0 terms for publication
242-
TransgeneExpressionHere: 1.3573s
240+
TermsForPub: 1.0642s
241+
└─ Found 2 terms for publication
242+
TransgeneExpressionHere: 1.2372s
243243
└─ Found 2346 transgene expressions, returned 10
244244
✅ All publication/transgene queries completed
245245
@@ -252,7 +252,7 @@ test_term_info_performance (src.test.term_info_queries_test.TermInfoQueriesTest)
252252
Performance test for specific term info queries. ... ok
253253
254254
----------------------------------------------------------------------
255-
Ran 1 test in 3.907s
255+
Ran 1 test in 2.392s
256256
257257
OK
258258
VFBquery functions patched with caching support
@@ -262,10 +262,10 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
262262
==================================================
263263
Performance Test Results:
264264
==================================================
265-
FBbt_00003748 query took: 2.4822 seconds
266-
VFB_00101567 query took: 1.4235 seconds
267-
Total time for both queries: 3.9057 seconds
268-
Performance Level: 🟠 Acceptable (3-6 seconds)
265+
FBbt_00003748 query took: 1.2008 seconds
266+
VFB_00101567 query took: 1.1905 seconds
267+
Total time for both queries: 2.3913 seconds
268+
Performance Level: 🟡 Good (1.5-3 seconds)
269269
==================================================
270270
Performance test completed successfully!
271271
```
@@ -283,4 +283,4 @@ Track performance trends across commits:
283283
- [GitHub Actions History](https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml)
284284

285285
---
286-
*Last updated: 2026-02-04 11:37:48 UTC*
286+
*Last updated: 2026-02-04 11:52:48 UTC*

0 commit comments

Comments
 (0)