-
Notifications
You must be signed in to change notification settings - Fork 3
Expand file tree
/
Copy pathtest-ModelMapping.jl
More file actions
313 lines (239 loc) · 10.2 KB
/
test-ModelMapping.jl
File metadata and controls
313 lines (239 loc) · 10.2 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
# Tests:
# Defining a list of models without status:
@testset "ModelMapping with no status" begin
leaf = ModelMapping(
process1=Process1Model(1.0),
process2=Process2Model()
)
inits = merge(init_variables(leaf.models)...)
st = Status{keys(inits)}(values(inits))
@test all(getproperty(leaf.status, i)[1] == getproperty(st, i) for i in keys(st))
@test !is_initialized(leaf)
@test to_initialize(leaf) == (process1=(:var1, :var2), process2=(:var1,))
@test length(status(leaf)) == 5
# Requiring 3 steps for initialization:
leaf = ModelMapping(
process1=Process1Model(1.0),
process2=Process2Model(),
)
@test length(status(leaf)) == 5
@test status(leaf, :var1) == -Inf
end;
@testset "process" begin
@test PlantSimEngine.process(Process1Model(1.0)) == :process1
@test PlantSimEngine.process(:process1 => Process1Model(1.0)) == :process1
models =
(
Process1Model(1.0),
Process2Model()
)
@test [(process(i), i) for i in models] == Tuple{Symbol,AbstractModel}[(:process1, Process1Model(1.0)), (:process2, Process2Model())]
models_named = (
process1=Process1Model(1.0),
process2=Process2Model()
)
@test [(process(i), i) for i in models_named] == [(process(i), i) for i in models]
end
@testset "ModelMapping with no process names" begin
with_names = ModelMapping(
process1=Process1Model(1.0),
process2=Process2Model()
)
without_names = ModelMapping(
Process1Model(1.0),
Process2Model()
)
@test with_names.models == without_names.models
@test with_names.status.var1 == without_names.status.var1
@test with_names.status.var2 == without_names.status.var2
end;
@testset "ModelMapping with a partially initialized status" begin
leaf = ModelMapping(
process1=Process1Model(1.0),
process2=Process2Model(),
status=(var1=15.0,)
)
inits = merge(init_variables(leaf.models)...)
st = Status{keys(inits)}(values(inits))
st.var1 = 15.0
@test all(getproperty(leaf.status, i)[1] == getproperty(st, i) for i in keys(st))
@test !is_initialized(leaf)
@test to_initialize(leaf) == (process1=(:var2,),)
# Requiring 3 steps for initialization:
leaf = ModelMapping(
process1=Process1Model(1.0),
process2=Process2Model(),
status=(var1=15.0,),
)
@test length(status(leaf)) == 5
@test status(leaf, :var1) == 15.0
end;
@testset "ModelMapping with fully initialized status" begin
vals = (var1=15.0, var2=0.3)
leaf = ModelMapping(
process1=Process1Model(1.0),
process2=Process2Model(),
status=vals
)
inits = merge(init_variables(leaf.models)...)
st = Status{keys(inits)}(values(inits))
for i in keys(vals)
setproperty!(st, i, getproperty(vals, i))
end
@test all(getproperty(leaf.status, i)[1] == getproperty(st, i) for i in keys(st))
@test is_initialized(leaf)
@test to_initialize(leaf) == NamedTuple()
end;
@testset "ModelMapping with independant models (and missing one in the middle)" begin
vals = (var1=15.0, var2=0.3)
leaf = ModelMapping(
process1=Process1Model(1.0),
process3=Process3Model(),
status=vals
)
@test to_initialize(leaf) == (process3=(:var5,),)
# NB: decompose this test because the order of the variables change with the Julia version
inits = init_variables(leaf)
sorted_vars = sort([keys(inits.process3)...])
@test [getfield(inits.process3, i) for i in sorted_vars] == fill(-Inf, 3)
end;
@testset "Copy a ModelMapping" begin
vars = (var1=15.0, var2=0.3)
# Create a model list:
models = ModelMapping(
process1=Process1Model(1.0),
process2=Process2Model(),
process3=Process3Model(),
status=vars
)
# Copy the model list:
ml2 = copy(models)
@test DataFrame(TimeStepTable([status(ml2)])) == DataFrame(TimeStepTable([status(models)]))
# Copy the model list with new status:
st = Status(var1=20.0, var2=0.5)
ml3 = copy(models, st)
@test status(ml3) == st
@test ml3.models == models.models
cp_models = copy([models, ml3])
@test cp_models == [models, ml3]
cp_models = copy(Dict("models" => models, "ml3" => ml3))
@test cp_models == Dict("models" => models, "ml3" => ml3)
end;
@testset "Convert ModelMapping status variables into new types" begin
ref_vars = init_variables(
process1=Process1Model(1.0),
process2=Process2Model(),
process3=Process3Model(),
)
type_promotion = Dict(Real => Float32)
process3_Float32 = PlantSimEngine.convert_vars(ref_vars.process3, type_promotion)
@test all([isa(getfield(process3_Float32, i), Float32) for i in keys(process3_Float32)])
process3_same = PlantSimEngine.convert_vars(ref_vars.process3, nothing)
@test process3_same == ref_vars.process3
end
@testset "ModelMapping dependencies" begin
models = ModelMapping(
process1=Process1Model(1.0),
process2=Process2Model(),
process3=Process3Model(),
process4=Process4Model(),
process5=Process5Model(),
process6=Process6Model(),
# process7=Process7Model(),
# status=(var1=15.0, var2=0.3)
)
deps = dep(models).roots
@test collect(keys(deps)) == [:process4]
@test deps[:process4].value == Process4Model()
@test isa(deps[:process4], PlantSimEngine.SoftDependencyNode)
process3 = deps[:process4].children[1]
@test process3.value == Process3Model()
@test isa(process3, PlantSimEngine.SoftDependencyNode)
@test process3.hard_dependency[1].value == Process2Model()
@test isa(process3.hard_dependency[1], PlantSimEngine.HardDependencyNode)
@test process3.hard_dependency[1].children[1].value == Process1Model(1.0)
@test isa(process3.hard_dependency[1].children[1], PlantSimEngine.HardDependencyNode)
@test process3.children[1].value == Process5Model()
@test isa(process3.children[1], PlantSimEngine.SoftDependencyNode)
end
# very naive function, doesn't generate full partition sets
# insert_errors : could duplicate a value, add a nonexistent one, make one the wrong type ?
#=function generate_output_tuple(vars_tuple, insert_errors, count)
outputs_tuples_vector = [NamedTuple()]
# number not exact, but trying every permutation sounds like a waste of time
for i in 1:max(count, length(vars_tuple))
new_tuple = ()
# TODO
new_tuple = (new_tuple..., new_var)
end
return outputs_tuples_vector
end=#
@testset "ModelMapping outputs preallocation" begin
meteo_day = CSV.read(joinpath(pkgdir(PlantSimEngine), "examples/meteo_day.csv"), DataFrame, header=18)
vals = (var1=15.0, var2=0.3, TT_cu=cumsum(meteo_day.TT))
leaf = ModelMapping(
process1=Process1Model(1.0),
process2=Process2Model(),
status=vals
)
outs = (:var3,)
@test test_filtered_output(leaf, vals, outs, meteo_day)
meteos =
[Atmosphere(T=20.0, Wind=1.0, P=101.3, Rh=0.65, Ri_PAR_f=300.0),
CSV.read(joinpath(pkgdir(PlantSimEngine), "examples/meteo_day.csv"), DataFrame, header=18),
]
modellists, status_tuples, outs_vectors = get_modellist_bank()
# remove some of the currently unhandled cases
outs_vectors =
[
# this one has one tuple with a duplicate, and one with a nonexistent variable
[(:var1,), (:var1, :var2), (:var1, :var3), (:var1, :var4, :var5), #=(:var1, :var1),=#
(:var1, :var2, :var3, :var4, :var5)], #=(:var2, :var7, :var3, :var1),=#
[(:TT_cu,), (:TT_cu, :LAI), (:biomass, :LAI), (:TT_cu, :LAI, :aPPFD, :biomass, :biomass_increment),], #=NamedTuple(),=#
[(:var1,), (:var1, :var4), (:var1, :var2), (:var1, :var3), (:var1, :var4, :var6, :var5), #=NamedTuple(),=#
(:var1, :var2, :var3, :var4, :var5, :var6)], #=(:var2, :var7, :var3, :var1),=#
[(:var1,), (:var1, :var4), (:var1, :var2), (:var1, :var3), (:var1, :var4, :var6, :var5), #=NamedTuple(),=#
(:var2, :var7, :var3, :var1), (:var1, :var2, :var3, :var4, :var5, :var6)],
[(:var1,), (:var1, :var4), (:var1, :var2), (:var1, :var3), (:var1, :var4, :var6, :var5), #=NamedTuple(),=#
(:var2, :var7, :var3, :var1), (:var1, :var2, :var3, :var4, :var5, :var6), (:var1, :var2, :var3, :var4, :var5, :var6, :var7, :var8, :var9)],
[(:var1,), (:var1, :var2), (:var1, :var3), (:var1, :var4, :var6, :var5), #=(:var1, :var1),=#
(:var2, :var7, :var3, :var1), (:var1, :var2, :var3, :var4, :var5, :var6), (:var1, :var2, :var3, :var4, :var5, :var6, :var7, :var0)], #=:var8, :var9,=#
]
for i in 1:length(modellists)
modellist = modellists[i]
status_tuple = status_tuples[i]
outs_vector = outs_vectors[i]
all_vars = init_variables(modellist)
#insert_errors = true
#outs_vector = generate_output_tuple(all_vars, insert_errors)
for j in 1:length(meteos)
meteo = meteos[j]
for k in 1:length(outs_vector)
out_tuple = outs_vector[k]
#print(i, " ", j, " ", k)
meteo_adjusted = PlantSimEngine.adjust_weather_timesteps_to_given_length(
PlantSimEngine.get_status_vector_max_length(modellist.status), meteo)
@test test_filtered_output(modellist, status_tuple, out_tuple, meteo_adjusted)
end
end
end
#mtg, mapping, outputs_mapping, nsteps, filtered_outputs_modellist = test_filtered_output_begin(modellists[1], status_tuples[1], outs_vectors[1][1], meteos[1])
#@test test_filtered_output(mtg, mapping, nsteps, outputs_mapping, meteo_day, filtered_outputs_modellist)
end
PlantSimEngine.@process "modellist_cycle" verbose = false
struct Reeb{T} <: AbstractModellist_CycleModel
k::T
end
function PlantSimEngine.run!(::Reeb, models, status, meteo, constants, extra=nothing)
status.LAI =
status.aPPFD + 0.4 * k
end
function PlantSimEngine.inputs_(::Reeb)
(aPPFD=-Inf,)
end
function PlantSimEngine.outputs_(::Reeb)
(LAI=-Inf,)
end
@testset "ModelMapping simple cyclic dependency detection" begin
@test_throws "Cyclic" m = ModelMapping(Beer(0.5), Reeb(0.5))
end