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Docs : a ref also needed fixing
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docs/src/prerequisites/key_concepts.md

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## PlantSimEngine terminology
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This page provides a general description of the concepts and terminology used in PlantSimEngine. For a more implementation-guided description of the design and some of the terms presented here, see the [Detailed walkthrough of a simple simulation](@ref)
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This page provides a general description of the concepts and terminology used in PlantSimEngine. For a more implementation-guided description of the design and some of the terms presented here, see the [Detailed walkthrough of a simple simulation](@ref detailed-walkthrough-of-a-simple-simulation)
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!!! Note
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Some terminology has different meanings in different contexts. This is particularly true of the terms organ, scale and symbol, which have a different meaning for [Multi-scale Tree Graphs](@ref) than the rest of PlantSimEngine (see [Scale/symbol terminology ambiguity](@ref) further down). Make sure to double-check those subsections, and relevant examples if you encounter issues relating to these terms.
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Models can also be used for ad hoc computations that aren't directly tied to a specific literature-defined physiological process. In PlantSimEngine, everything is a model. There are many instances where a custom model might be practical to aggregate some computations or handle other information. To illustrate, XPalm, the Oil Palm model, has a few models that handle the state of different organs, and a model to handle leaf pruning, which you can find [here](https://github.com/PalmStudio/XPalm.jl/blob/main/src/plant/phytomer/leaves/leaf_pruning.jl).
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To prepare a simulation, you declare a ModelList with whatever models you wish to make use of and initialize necessary parameters: see the [step_by_step](@ref detailed-walkthrough-of-a-simple-simulation) section to learn how to use them in practice.
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To prepare a simulation, you declare a ModelList with whatever models you wish to make use of and initialize necessary parameters: see the [step by step](@ref detailed-walkthrough-of-a-simple-simulation) section to learn how to use them in practice.
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For multi-scale simulations, models need to be tied to a particular scale when used. See the [Multiscale modeling](@ref) section below, or the [Multi-scale considerations](@ref) page for a more detailed description of multi-scale peculiarities.
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docs/src/step_by_step/detailed_first_example.md

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# Detailed walkthrough of a simple simulation
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# [Detailed walkthrough of a simple simulation](@id detailed-walkthrough-of-a-simple-simulation)
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This page walks you through the ins and outs of a basic simulation, mostly aimed at people who have less experience programming, to showcase the various concepts presented earlier and requirements for a simulation in context.
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