fix(anomaly scores): Standardize column names for the Run name

tonywu1999 · tonywu1999 · commit e07500c38252 · 2026-05-26T16:11:55.000-04:00
diff --git a/.Rbuildignore b/.Rbuildignore
@@ -6,3 +6,5 @@
 ^_pkgdown\.yml$
 ^docs$
 ^pkgdown$
+^\.positai$
+^\.claude$
diff --git a/.gitignore b/.gitignore
@@ -10,4 +10,5 @@ inst/doc
 *.so
 *.dll
 .lintr
-.vscode
+.vscode
+.positai
diff --git a/R/utils_anomaly_score.R b/R/utils_anomaly_score.R
@@ -32,6 +32,7 @@
     input = input[feature_counts, on = .(ProteinName, Fragment)]
     
     # Model at PSM level
+    run_order$Run = .standardizeColnames(run_order$Run)
     input = merge(input, run_order, by="Run", 
                   all.x=TRUE, all.y=FALSE)
     cols=c("ProteinName", "PSM", "Run", "Order", quality_metrics)

-Original file line number
+Diff line change
 *.so
 *.dll
 .lintr
 -.vscode
 +.vscode
 +.positai