update manuals

Author: tonywu1999

DESCRIPTION

@@ -54,13 +54,18 @@ Collate:
     'converters_DIAUmpiretoMSstatsFormat.R'
     'converters_FragPipetoMSstatsFormat.R'
     'converters_MaxQtoMSstatsFormat.R'
+    'converters_MaxQtoMSstatsTMTFormat.R'
     'converters_MetamorpheusToMSstatsFormat.R'
     'converters_OpenMStoMSstatsFormat.R'
+    'converters_OpenMStoMSstatsTMTFormat.R'
     'converters_OpenSWATHtoMSstatsFormat.R'
     'converters_PDtoMSstatsFormat.R'
+    'converters_PDtoMSstatsTMTFormat.R'
+    'converters_PhilosophertoMSstatsTMTFormat.R'
     'converters_ProgenesistoMSstatsFormat.R'
     'converters_ProteinProspectortoMSstatsTMTFormat.R'
     'converters_SkylinetoMSstatsFormat.R'
+    'converters_SpectroMinetoMSstatsTMTFormat.R'
     'converters_SpectronauttoMSstatsFormat.R'
     'utils_MSstatsConvert.R'
     'utils_annotation.R'

NAMESPACE

@@ -15,13 +15,18 @@ export(MSstatsMakeAnnotation)
 export(MSstatsPreprocess)
 export(MSstatsSaveSessionInfo)
 export(MaxQtoMSstatsFormat)
+export(MaxQtoMSstatsTMTFormat)
 export(MetamorpheusToMSstatsFormat)
 export(OpenMStoMSstatsFormat)
+export(OpenMStoMSstatsTMTFormat)
 export(OpenSWATHtoMSstatsFormat)
 export(PDtoMSstatsFormat)
+export(PDtoMSstatsTMTFormat)
+export(PhilosophertoMSstatsTMTFormat)
 export(ProgenesistoMSstatsFormat)
 export(ProteinProspectortoMSstatsTMTFormat)
 export(SkylinetoMSstatsFormat)
+export(SpectroMinetoMSstatsTMTFormat)
 export(SpectronauttoMSstatsFormat)
 export(getDataType)
 export(getInputFile)