Skip to content

Commit 2229603

Browse files
author
Liu
committed
Improvement for setup
1 parent e848160 commit 2229603

2 files changed

Lines changed: 2 additions & 2 deletions

File tree

bin/DeepMod.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -137,7 +137,7 @@ def mDetect(margs):
137137
print("No mod file is provided. The default one is used")
138138
moptions['modfile'] = ('train_deepmod/rnn_P90wd%d_f53/mod_train_P90wd%d_f53' % (moptions['windowsize'], moptions['windowsize']))
139139
if (not os.path.isfile(moptions['modfile']+'.meta')):
140-
moptions['modfile'] = ('%s/train_deepmod/rnn_P90wd%d_f53/mod_train_P90wd%d_f53' % (sys.prefix, moptions['windowsize'], moptions['windowsize']))
140+
moptions['modfile'] = ('{}/lib/python{}.{}/site-packages/DeepMod/train_deepmod/rnn_P90wd%d_f53/mod_train_P90wd%d_f53' % (sys.prefix,sys.version_info.major,sys.version_info.minor, moptions['windowsize'], moptions['windowsize']))
141141
if (not os.path.isfile(moptions['modfile']+'.meta')):
142142
ErrorMessage = ErrorMessage + ("\n\tThe meta file (%s) does not exist" % (moptions['modfile']+'.meta' if not moptions['modfile']==None else ""))
143143
else:

setup.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -10,7 +10,7 @@
1010

1111
setuptools.setup(
1212
name="DeepMod", # Replace with your own username
13-
version="0.1.2",
13+
version="0.1.3",
1414
author="Qian Liu",
1515
author_email="liuqianhn@gmail.com",
1616
description="A deep-learning tool to detect DNA modifications using Nanopore long-read sequencing data",

0 commit comments

Comments
 (0)