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AndyEck16Andy
andauthored
Fix error in brain plot on net results (#113)
Co-authored-by: Andy <me@something.com>
1 parent 333d1d0 commit 8f438d1

1 file changed

Lines changed: 3 additions & 2 deletions

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+nla/+gfx/+brain/BrainPlot.m

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -332,7 +332,7 @@ function drawCortex(obj, anatomy, plot_axis, view_position, left_color, right_co
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edges = [edges, obj.drawEdges(ROI_final_positions, plot_axis)];
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else
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obj.mesh_alpha = 1;
335-
[ROI_final_positions, ROI_colors] = obj.getROIPositions(view_position, nla.gfx.BrainColorMode.COLOR_ROIS);
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[ROI_final_positions, ROI_colors] = obj.getROIPositions(view_position, nla.gfx.BrainColorMode.COLOR_ROIS, obj.mapColorsToLimits(obj.ROI_values,0));
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if ~isequal(color_mode, nla.gfx.BrainColorMode.NONE) && obj.surface_parcels && ~islogical(obj.network_atlas.parcels) && isequal(size(obj.network_atlas.parcels.ctx_l,1), size(obj.network_atlas.anat.hemi_l.nodes, 1)) && isequal(size(obj.network_atlas.parcels.ctx_r, 1), size(obj.network_atlas.anat.hemi_r.nodes, 1))
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ROI_color_map = [0.5 0.5 0.5; ROI_colors];
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obj.drawCortex(obj.network_atlas.anat, plot_axis, view_position, ROI_color_map(obj.network_atlas.parcels.ctx_l + 1, :), ROI_color_map(obj.network_atlas.parcels.ctx_r + 1, :));
@@ -347,7 +347,8 @@ function drawCortex(obj, anatomy, plot_axis, view_position, left_color, right_co
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end
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end
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350-
if (~isfield(obj.edge_test_options, "show_ROI_centroids")) || (isfield(obj.edge_test_options, "show_ROI_centroids") && isequal(obj.edge_test_options.show_ROI_centroids, true))
350+
%if (~isfield(obj.edge_test_options, "show_ROI_centroids")) || (isfield(obj.edge_test_options, "show_ROI_centroids") && isequal(obj.edge_test_options.show_ROI_centroids, true))
351+
if obj.network_test_options.show_ROI_centroids
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obj.drawROISpheres(ROI_final_positions, plot_axis, connectivity_map);
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end
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