Update __init__.py

Author: zandigohar

ragulate_bio/__init__.py

@@ -1,25 +1,61 @@
 # ragulate_bio/__init__.py
-__all__ = ["about"]
-__version__ = "1.0.1"
+
+__version__ = "1.1.0"
 
 def about():
     return {
         "name": "Ragulate-Bio",
         "version": __version__,
-        "summary": "Retrieval augmented validation for TF inference in single cell biology"
+        "summary": "Retrieval augmented validation for TF inference in single cell biology",
     }
 
+# Expose public submodules
+from . import (
+    config,
+    state,
+    logging_utils,
+    embedding,
+    retrieval,
+    llm_models,
+    rag,
+    metrics,
+    pipeline,
+    io_utils,
+    plots,
+)
+
+__all__ = [
+    "about",
+    "__version__",
+    "config",
+    "state",
+    "logging_utils",
+    "embedding",
+    "retrieval",
+    "llm_models",
+    "rag",
+    "metrics",
+    "pipeline",
+    "io_utils",
+    "plots",
+]
+
 # Optional gentle conflict warning so users know about the other 'ragulate'
 def _warn_if_conflicting():
     try:
         import importlib.metadata as im
+
         names = {d.metadata["Name"].lower() for d in im.distributions()}
         if "ragulate" in names:
             import warnings
+
             warnings.warn(
                 "Another package named 'ragulate' is installed. "
                 "Use 'import ragulate_bio' for this package."
             )
     except Exception:
         pass
-_warn_if_conflicting(); del _warn_if_conflicting
+
+
+_warn_if_conflicting()
+del _warn_if_conflicting