upgraded pyo version (#8)

* upgraded pyo version

* Update pr-test.yml

Author: YertleTurtleGit

.github/workflows/pr-test.yml

@@ -16,6 +16,7 @@ jobs:
           pip install nbconvert
           pip install black_nbconvert
           pip install markupsafe==2.0.1
+          pip install toml
           if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
           git config --local user.email "action@github.com"
           git config --local user.name "GitHub Action"

Cargo.toml

@@ -1,14 +1,14 @@
 [package]
 name = "graph_pca"
-version = "0.2.0"
+version = "0.3.0"
 edition = "2021"
 
 [dependencies]
-pyo3 = { version = "0.21.1", features = ["extension-module"] }
-nalgebra = "0.32.3"
+pyo3 = { version = "0.29.0", features = ["extension-module"] }
+nalgebra = "0.35.0"
 rayon = "1.8.0"
-kdtree = "0.7.0"
-petgraph = "0.6.4"
+kdtree = "0.8.0"
+petgraph = "0.8.3"
 
 [lib]
 name = "graph_pca"
@@ -19,4 +19,4 @@ crate-type = ["cdylib"]
 codegen-units = 1
 lto = "fat"
 panic = "abort"
-strip = "symbols"
+strip = "symbols"

src/graph_pca_lib.rs

@@ -127,7 +127,7 @@ fn get_pca(eigenvalues: &[f64]) -> Vec<f64> {
         .collect()
 }
 
-#[pyclass]
+#[pyclass(from_py_object)]
 #[derive(Clone, PartialEq)]
 pub enum Feature {
     Eigenvalues,
@@ -198,3 +198,4 @@ pub fn calculate_features(
 
     vectors_per_feature
 }
+

src/python_lib.rs

@@ -3,7 +3,7 @@ use pyo3::prelude::*;
 mod graph_pca_lib;
 
 #[pymodule]
-fn graph_pca(_py: Python<'_>, module: &PyModule) -> PyResult<()> {
+fn graph_pca(module: &Bound<'_, PyModule>) -> PyResult<()> {
     module.add_function(wrap_pyfunction!(calculate_features, module)?)?;
     module.add_class::<Feature>()?;
     Ok(())