Upgrade NodeJS dependencies and rebuild server/dist/** (#189)

* Upgrade NodeJS dependencies

* Override vite deps to remove lightningcss

Adds an `overrides` config in root `package.json` to force the
vite dependency to not require the installation of transitive
depdendencies related to lightningcss, which has licensing concerns
yet is unused by this project.

* Revert "Override vite deps to remove lightningcss"

This reverts commit 51f1f5a.

Author: data-douser

client/package.json

@@ -27,7 +27,7 @@
     "npm": ">=11.6.2"
   },
   "dependencies": {
-    "@modelcontextprotocol/sdk": "^1.27.1",
+    "@modelcontextprotocol/sdk": "^1.28.0",
     "dotenv": "^17.3.1",
     "js-yaml": "^4.1.1"
   },

extensions/vscode/package.json

@@ -165,7 +165,7 @@
     "@types/mocha": "^10.0.10",
     "@types/node": "^25.5.0",
     "@types/vscode": "^1.110.0",
-    "@vitest/coverage-v8": "^4.1.0",
+    "@vitest/coverage-v8": "^4.1.2",
     "@vscode/test-cli": "^0.0.12",
     "@vscode/test-electron": "^2.5.2",
     "@vscode/vsce": "^3.7.1",
@@ -177,7 +177,7 @@
     "mocha": "^11.7.5",
     "prettier": "^3.8.1",
     "typescript": "^5.9.3",
-    "typescript-eslint": "^8.57.1",
-    "vitest": "^4.1.0"
+    "typescript-eslint": "^8.57.2",
+    "vitest": "^4.1.2"
   }
 }