cicd: replace pre commit with prek

.github/workflows/pre-commit.yaml

@@ -3,7 +3,7 @@
 # SPDX-License-Identifier: MPL-2.0
 
 name: |
-  (CI) Pre-commit
+  (CI) prek
 permissions:
   contents: read
   pull-requests: write
@@ -19,7 +19,7 @@ on:
 
 
 jobs:
-  pre-commit:
+  prek:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repository
@@ -31,12 +31,12 @@ jobs:
       - name: Install Poetry
         if: ${{ hashFiles('.pre-commit-config.yaml') != '' }}
         run: pipx install --python python${{ inputs.python-version }} poetry
-      - name: Install pre-commit
+      - name: Install prek
         if: ${{ hashFiles('.pre-commit-config.yaml') != '' }}
         run: |
-          pip install pre-commit
-          pre-commit install
-      - name: Run pre-commit
+          pip install prek
+          prek install
+      - name: Run prek
         if: ${{ hashFiles('.pre-commit-config.yaml') != '' }}
         shell: bash
-        run: pre-commit run -a
+        run: prek run -a

.pre-commit-config.yaml

@@ -2,9 +2,9 @@
 #
 # SPDX-License-Identifier: MPL-2.0
 
-# This pre-commit config can be installed by running
-# 'pip install pre-commit'.
-# 'pre-commit install'.
+# This prek config can be installed by running
+# 'pip install prek'.
+# 'prek install'.
 repos:
 -   repo: https://gitlab.com/vojko.pribudic.foss/pre-commit-update
     rev: v0.9.0
@@ -18,7 +18,7 @@ repos:
 
 -   repo: https://github.com/astral-sh/ruff-pre-commit
     # Ruff version.
-    rev: v0.15.1
+    rev: v0.15.6
     hooks:
       # Run the linter.
     -   id: ruff
@@ -36,14 +36,14 @@ repos:
 
   # Check commit messages for conventional commits formatting.
 -   repo: https://github.com/compilerla/conventional-pre-commit
-    rev: v4.3.0
+    rev: v4.4.0
     hooks:
     -   id: conventional-pre-commit
         stages: [commit-msg]
         args: []
   # Fix common spelling mistakes
 -   repo: https://github.com/codespell-project/codespell
-    rev: v2.4.1
+    rev: v2.4.2
     hooks:
     -   id: codespell
         exclude: "pyproject.toml|poetry.lock|docs/theoretical_documentation/model.md|docs/examples/"
@@ -57,7 +57,7 @@ repos:
 
   # Linter for markdown files.
 -   repo: https://github.com/igorshubovych/markdownlint-cli
-    rev: v0.47.0
+    rev: v0.48.0
     hooks:
     -   id: markdownlint
         args: ["--ignore", "docs/theoretical_documentation/model.md"]

CONTRIBUTING.md

@@ -47,7 +47,7 @@ the following for details on how to contribute:
     - for contributions to the documentation page, make sure you install
       the correct dependencies using `poetry install --with docs`, too.
 4. Activate the poetry shell: `poetry shell`.
-5. Set up pre-commit hooks: `pre-commit install`. Every time you commit, this
+5. Set up prek hooks: `prek install`. Every time you commit, this
    will run hooks to ensure your code is properly formatted.
 6. Make a new branch from `main`
    - If your branch will be related to a Jira ticket (which we recommend), you
@@ -57,13 +57,15 @@ the following for details on how to contribute:
 
 ### During development
 
-To check if `pre-commit` was properly installed, run `pre-commit run -a`. You
+To check if `prek` was properly installed, run `prek run -a`. You
 should see the following:
 
 ```bash
-$ pre-commit run -a
-ruff.....................................................................Passed
-ruff-format..............................................................Passed
+$ prek run -a
+pre-commit-update........................................................Passed
+reuse lint...............................................................Passed
+ruff (legacy alias)......................................................Passed
+ruff format..............................................................Passed
 mypy.....................................................................Passed
 codespell................................................................Passed
 Poetry check.............................................................Passed
@@ -159,7 +161,7 @@ changes in the squashed commit, which is also fine.
 
 So, in short:
 
-1. Run `pre-commit -a` locally.
+1. Run `prek -a` locally.
 2. Run `pytest` locally.
 3. Check your local commit messages before pushing.
 4. `git push`

pyproject.toml

@@ -28,11 +28,11 @@ pytest = "^9.0.2"
 ruff = "^0.15.1"
 mypy = "^1.18.0"
 pytest-cov = "^7.0.0"
-pre-commit = "^4.1.0"
 codespell = "^2.4.1"
 ipython = "^9.3.0"
 isort = "^7.0.0"
 mutmut = "^3.3.1"
+prek = "^0.3.5"
 
 [tool.poetry.group.docs]
 optional = true