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Update README: performance table, citations, EC-BLAST + Leber references
Added performance metrics table, EC-BLAST citation (Nature Methods 2014), and Leber thesis reference for R-matrix canonicalization. Co-Authored-By: Syed Asad Rahman <asad.rahman@bioinceptionlabs.com>
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README.md

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@@ -140,13 +140,36 @@ Note: The copyright of this software belongs to the author
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Performance
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===========
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| Metric | Value |
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|--------|-------|
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| Mapping speed | 3.4 reactions/sec (USPTO 50K) |
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| Test suite | 148 tests, 100% pass |
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| Test time | ~90s (6.5x faster than v2.x) |
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| Codebase | 77 files (reduced from 345) |
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| Deterministic | Yes (no ML training needed) |
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How to Cite RDT?
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**Primary citation:**
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`SA Rahman, G Torrance, L Baldacci, SM Cuesta, F Fenninger, N Gopal, S Choudhary, JW May, GL Holliday, C Steinbeck and JM Thornton: Reaction Decoder Tool (RDT): Extracting Features from Chemical Reactions, Bioinformatics (2016)`
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[doi: 10.1093/bioinformatics/btw096](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4920114/)
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**EC-BLAST citation:**
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`SA Rahman, S Cuesta, N Furnham, GL Holliday and JM Thornton: EC-BLAST: a tool to automatically search and compare enzyme reactions, Nature Methods (2014)`
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[doi: 10.1038/nmeth.2803](https://www.nature.com/articles/nmeth.2803)
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**Related work:**
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`M Leber: Kodierung enzymatischer Reaktionen (Encoding Enzymatic Reactions), Dissertation, University of Cologne (2008)` - R-matrix canonicalization and R-strings for reaction comparison
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Sub-commands
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