Skip to content

Commit 3f7aabc

Browse files
committed
Update data from Google Sheets and PubMed
1 parent 52e4614 commit 3f7aabc

40 files changed

Lines changed: 12058 additions & 1 deletion

_data/repos.yml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -942,7 +942,7 @@
942942
language: HTML
943943
stars: 2
944944
forks: 5
945-
updated_at: '2026-05-19'
945+
updated_at: '2026-05-20'
946946
visibility: public
947947
category: Data Platforms & Infrastructure
948948
category_slug: data-platforms-infrastructure

_data/yamlHRV_ECG.yml

Lines changed: 131 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -3064,6 +3064,137 @@
30643064
url: https://bdsp-core.github.io/cdac-downloads/2020_Sun_Sleep_31863111.pdf
30653065
display: 'Sleep. 2020. 43(7). doi: 10.1093/sleep/zsz306. PMID: 31863111.'
30663066
highlight: 0
3067+
- title: '"Automatic Detection of General Anesthetic-States using ECG-Derived Autonomic
3068+
Nervous System Features."'
3069+
image: ''
3070+
description: ''
3071+
authors: Polk SL, Kashkooli K, Nagaraj SB, Chamadia S, Murphy JM, Sun H, Westover
3072+
MB, Barbieri R, Akeju O
3073+
link:
3074+
url: https://bdsp-core.github.io/cdac-downloads/2019_Polk_AnnuIntConfIEEEEngMedBiolSoc_31946297.pdf
3075+
display: 'Annual International Conference of the IEEE Engineering in Medicine
3076+
and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual
3077+
International Conference. 2019. 2019. 2019-2022. doi: 10.1109/EMBC.2019.8857704.
3078+
PMID: 31946297.'
3079+
highlight: 0
3080+
- title: '"You Snooze, You Win: the PhysioNet/Computing in Cardiology Challenge 2018."'
3081+
image: ''
3082+
description: ''
3083+
authors: Ghassemi MM, Moody BE, Lehman LH, Song C, Li Q, Sun H, Mark RG, Westover
3084+
MB, Clifford GD
3085+
link:
3086+
url: https://bdsp-core.github.io/cdac-downloads/2018_Ghassemi_ComputCardiol2010_34796237.pdf
3087+
display: 'Computing in cardiology. 2018. 45. doi: 10.22489/cinc.2018.049. PMID:
3088+
34796237.'
3089+
highlight: 0
3090+
- title: '"ADARRI: a novel method to detect spurious R-peaks in the electrocardiogram
3091+
for heart rate variability analysis in the intensive care unit."'
3092+
image: ''
3093+
description: ''
3094+
authors: Rebergen DJ, Nagaraj SB, Rosenthal ES, Bianchi MT, van Putten MJAM, Westover
3095+
MB
3096+
link:
3097+
url: https://bdsp-core.github.io/cdac-downloads/2018_Rebergen_JClinMonitComput_28210934.pdf
3098+
display: 'Journal of clinical monitoring and computing. 2018. 32(1). 53-61. doi:
3099+
10.1007/s10877-017-9999-9. PMID: 28210934.'
3100+
highlight: 0
3101+
- title: '"Patient-Specific Classification of ICU Sedation Levels From Heart Rate
3102+
Variability."'
3103+
image: ''
3104+
description: ''
3105+
authors: Nagaraj SB, Biswal S, Boyle EJ, Zhou DW, McClain LM, Bajwa EK, Quraishi
3106+
SA, Akeju O, Barbieri R, Purdon PL, Westover MB
3107+
link:
3108+
url: https://bdsp-core.github.io/cdac-downloads/2017_Nagaraj_CritCareMed_28441231.pdf
3109+
display: 'Critical care medicine. 2017. 45(7). e683-e690. doi: 10.1097/CCM.0000000000002364.
3110+
PMID: 28441231.'
3111+
highlight: 0
3112+
- title: '"Heart rate variability as a biomarker for sedation depth estimation in
3113+
ICU patients."'
3114+
image: ''
3115+
description: ''
3116+
authors: Nagaraj SB, Ramaswamy SM, Biswal S, Boyle EJ, Zhou DW, Mcclain LM, Rosenthal
3117+
ES, Purdon PL, Westover MB
3118+
link:
3119+
url: https://bdsp-core.github.io/cdac-downloads/2016_Nagaraj_AnnuIntConfIEEEEngMedBiolSoc_28269712.pdf
3120+
display: 'Annual International Conference of the IEEE Engineering in Medicine
3121+
and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual
3122+
International Conference. 2016. 2016. 6397-6400. doi: 10.1109/EMBC.2016.7592192.
3123+
PMID: 28269712.'
3124+
highlight: 0
3125+
- title: '"Automatic Classification of Sedation Levels in ICU Patients Using Heart
3126+
Rate Variability."'
3127+
image: ''
3128+
description: ''
3129+
authors: Nagaraj SB, McClain LM, Zhou DW, Biswal S, Rosenthal ES, Purdon PL, Westover
3130+
MB
3131+
link:
3132+
url: https://bdsp-core.github.io/cdac-downloads/2016_Nagaraj_CritCareMed_27035240.pdf
3133+
display: 'Critical care medicine. 2016. 44(9). e782-9. doi: 10.1097/CCM.0000000000001708.
3134+
PMID: 27035240.'
3135+
highlight: 0
3136+
- title: '"Classification algorithms for predicting sleepiness and sleep apnea severity."'
3137+
image: ''
3138+
description: ''
3139+
authors: Eiseman NA, Westover MB, Mietus JE, Thomas RJ, Bianchi MT
3140+
link:
3141+
url: https://bdsp-core.github.io/cdac-downloads/2012_Eiseman_JSleepRes_21752133.pdf
3142+
display: 'Journal of sleep research. 2012. 21(1). 101-12. doi: 10.1111/j.1365-2869.2011.00935.x.
3143+
PMID: 21752133.'
3144+
highlight: 0
3145+
- title: '"The Harvard-Emory ECG Database."'
3146+
image: ''
3147+
description: ''
3148+
authors: Koscova Z, Li Q, Robichaux C, Junior VM, Ghanta M, Gupta A, Rosand J, Aguirre
3149+
AD, Reinertsen E, Song S, Hong S, Albert DE, Xue J, Parekh A, Sameni R, Reyna
3150+
MA, Westover MB, Clifford GD
3151+
link:
3152+
url: https://bdsp-core.github.io/cdac-downloads/2026_Koscova_SciData_41741499.pdf
3153+
display: 'Scientific data. 2026. 13(1). doi: 10.1038/s41597-026-06861-9. PMID:
3154+
41741499.'
3155+
highlight: 0
3156+
- title: '"An Electrocardiogram Foundation Model Built on over 10 Million Recordings."'
3157+
image: ''
3158+
description: ''
3159+
authors: Li J, Aguirre AD, Moura V, Jin J, Liu C, Zhong L, Sun C, Clifford G, Westover
3160+
MB, Hong S
3161+
link:
3162+
url: https://bdsp-core.github.io/cdac-downloads/2025_Li_NEJMAI_40771651.pdf
3163+
display: 'NEJM AI. 2025. 2(7). doi: 10.1056/aioa2401033. PMID: 40771651.'
3164+
highlight: 0
3165+
- title: '"The Harvard-Emory ECG Database."'
3166+
image: ''
3167+
description: ''
3168+
authors: Koscova Z, Li Q, Robichaux C, Junior VM, Ghanta M, Gupta A, Rosand J, Aguirre
3169+
A, Hong S, Albert DE, Xue J, Parekh A, Sameni R, Reyna MA, Westover MB, Cliford
3170+
GD
3171+
link:
3172+
url: https://bdsp-core.github.io/cdac-downloads/2025_Koscova_medRxiv_40385443.pdf
3173+
display: 'medRxiv : the preprint server for health sciences. 2025. doi: 10.1101/2024.09.27.24314503.
3174+
PMID: 40385443.'
3175+
highlight: 0
3176+
- title: '"Sleep staging in the ICU with heart rate variability and breathing signals.
3177+
An exploratory cross-sectional study using deep neural networks."'
3178+
image: ''
3179+
description: ''
3180+
authors: Ganglberger W, Krishnamurthy PV, Quadri SA, Tesh RA, Bucklin AA, Adra N,
3181+
Da Silva Cardoso M, Leone MJ, Hemmige A, Rajan S, Panneerselvam E, Paixao L, Higgins
3182+
J, Ayub MA, Shao YP, Coughlin B, Sun H, Ye EM, Cash SS, Thompson BT, Akeju O,
3183+
Kuller D, Thomas RJ, Westover MB
3184+
link:
3185+
url: https://bdsp-core.github.io/cdac-downloads/2023_Ganglberger_FrontNetwPhysiol_36926545.pdf
3186+
display: 'Frontiers in network physiology. 2023. 3. 1120390. doi: 10.3389/fnetp.2023.1120390.
3187+
PMID: 36926545.'
3188+
highlight: 0
3189+
- title: '"Sleep staging from electrocardiography and respiration with deep learning."'
3190+
image: ''
3191+
description: ''
3192+
authors: Sun H, Ganglberger W, Panneerselvam E, Leone MJ, Quadri SA, Goparaju B,
3193+
Tesh RA, Akeju O, Thomas RJ, Westover MB
3194+
link:
3195+
url: https://bdsp-core.github.io/cdac-downloads/2020_Sun_Sleep_31863111.pdf
3196+
display: 'Sleep. 2020. 43(7). doi: 10.1093/sleep/zsz306. PMID: 31863111.'
3197+
highlight: 0
30673198
- title: '"You Snooze, You Win: the PhysioNet/Computing in Cardiology Challenge 2018."'
30683199
image: ''
30693200
description: ''

_data/yamlICUEEGterminology.yml

Lines changed: 97 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -2229,6 +2229,103 @@
22292229
display: 'The open medical informatics journal. 2012. 6. 36-50. doi: 10.2174/1874431101206010036.
22302230
PMID: 23304251.'
22312231
highlight: 0
2232+
- title: '"Evaluating crowdsourcing for ICU EEG annotation: A comparison with expert
2233+
performance."'
2234+
image: ''
2235+
description: ''
2236+
authors: Kong WY, Nascimento FA, Struck A, Duhaime E, Kapur S, Amorim E, Kapinos
2237+
G, Rodriguez A, Thomas B, Desai M, Lee JW, Westover MB, Jing J
2238+
link:
2239+
url: https://bdsp-core.github.io/cdac-downloads/2025_Kong_Unknown_40768345.pdf
2240+
display: 'Epilepsia. 2025. 66(11). 4366-4380. doi: 10.1111/epi.18547. PMID: 40768345.'
2241+
highlight: 0
2242+
- title: '"Systematic Evaluation of Research Priorities in Critical Care Electroencephalography."'
2243+
image: ''
2244+
description: ''
2245+
authors: Sheikh Z, Selioutski O, Taraschenko O, Gilmore EJ, Westover MB, Cohen AB
2246+
link:
2247+
url: https://bdsp-core.github.io/cdac-downloads/2022_Sheikh_JClinNeurophysiol_35066530.pdf
2248+
display: 'Journal of clinical neurophysiology : official publication of the American
2249+
Electroencephalographic Society. 2023. 40(5). 426-433. doi: 10.1097/WNP.0000000000000916.
2250+
PMID: 35066530.'
2251+
highlight: 0
2252+
- title: '"Using electronic health data to explore effectiveness of ICU EEG and anti-seizure
2253+
treatment."'
2254+
image: ''
2255+
description: ''
2256+
authors: Amerineni R, Sun H, Lee H, Hsu J, Patorno E, Westover MB, Zafar SF
2257+
link:
2258+
url: https://bdsp-core.github.io/cdac-downloads/2021_Amerineni_AnnClinTranslNeurol_34802196.pdf
2259+
display: 'Annals of clinical and translational neurology. 2021. 8(12). 2270-2279.
2260+
doi: 10.1002/acn3.51478. PMID: 34802196.'
2261+
highlight: 0
2262+
- title: '"American Clinical Neurophysiology Society''s Standardized Critical Care
2263+
EEG Terminology: 2021 Version."'
2264+
image: ''
2265+
description: ''
2266+
authors: Hirsch LJ, Fong MWK, Leitinger M, LaRoche SM, Beniczky S, Abend NS, Lee
2267+
JW, Wusthoff CJ, Hahn CD, Westover MB, Gerard EE, Herman ST, Haider HA, Osman
2268+
G, Rodriguez-Ruiz A, Maciel CB, Gilmore EJ, Fernandez A, Rosenthal ES, Claassen
2269+
J, Husain AM, Yoo JY, So EL, Kaplan PW, Nuwer MR, van Putten M, Sutter R, Drislane
2270+
FW, Trinka E, Gaspard N
2271+
link:
2272+
url: https://bdsp-core.github.io/cdac-downloads/2021_Hirsch_JClinNeurophysiol_33475321.pdf
2273+
display: 'Journal of clinical neurophysiology : official publication of the American
2274+
Electroencephalographic Society. 2021. 38(1). 1-29. doi: 10.1097/WNP.0000000000000806.
2275+
PMID: 33475321.'
2276+
highlight: 0
2277+
- title: '"Development and Feasibility Testing of a Critical Care EEG Monitoring Database
2278+
for Standardized Clinical Reporting and Multicenter Collaborative Research."'
2279+
image: ''
2280+
description: ''
2281+
authors: Lee JW, LaRoche S, Choi H, Rodriguez Ruiz AA, Fertig E, Politsky JM, Herman
2282+
ST, Loddenkemper T, Sansevere AJ, Korb PJ, Abend NS, Goldstein JL, Sinha SR, Dombrowski
2283+
KE, Ritzl EK, Westover MB, Gavvala JR, Gerard EE, Schmitt SE, Szaflarski JP, Ding
2284+
K, Haas KF, Buchsbaum R, Hirsch LJ, Wusthoff CJ, Hopp JL, Hahn CD
2285+
link:
2286+
url: https://bdsp-core.github.io/cdac-downloads/2016_Lee_JClinNeurophysiol_26943901.pdf
2287+
display: 'Journal of clinical neurophysiology : official publication of the American
2288+
Electroencephalographic Society. 2016. 33(2). 133-40. doi: 10.1097/WNP.0000000000000230.
2289+
PMID: 26943901.'
2290+
highlight: 0
2291+
- title: '"The standardization debate: A conflation trap in critical care electroencephalography."'
2292+
image: ''
2293+
description: ''
2294+
authors: Ng MC, Gaspard N, Cole AJ, Hoch DB, Cash SS, Bianchi M, O'Rourke DA, Rosenthal
2295+
ES, Chu CJ, Westover MB
2296+
link:
2297+
url: https://bdsp-core.github.io/cdac-downloads/2015_Ng_Seizure_25457454.pdf
2298+
display: 'Seizure. 2015. 24. 52-8. doi: 10.1016/j.seizure.2014.09.017. PMID: 25457454.'
2299+
highlight: 0
2300+
- title: '"Interrater agreement for Critical Care EEG Terminology."'
2301+
image: ''
2302+
description: ''
2303+
authors: Gaspard N, Hirsch LJ, LaRoche SM, Hahn CD, Westover MB
2304+
link:
2305+
url: https://bdsp-core.github.io/cdac-downloads/2014_Gaspard_Epilepsia_24888711.pdf
2306+
display: 'Epilepsia. 2014. 55(9). 1366-73. doi: 10.1111/epi.12653. PMID: 24888711.'
2307+
highlight: 0
2308+
- title: '"Real-time segmentation and tracking of brain metabolic state in ICU EEG
2309+
recordings of burst suppression."'
2310+
image: ''
2311+
description: ''
2312+
authors: Westover MB, Ching S, Shafi MM, Cash SS, Brown EN
2313+
link:
2314+
url: https://bdsp-core.github.io/cdac-downloads/2013_Westover_AnnuIntConfIEEEEngMedBiolSoc_24111383.pdf
2315+
display: 'Annual International Conference of the IEEE Engineering in Medicine
2316+
and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual
2317+
International Conference. 2013. 2013. 7108-11. doi: 10.1109/EMBC.2013.6611196.
2318+
PMID: 24111383.'
2319+
highlight: 0
2320+
- title: '"Information theoretic quantification of diagnostic uncertainty."'
2321+
image: ''
2322+
description: ''
2323+
authors: Westover MB, Eiseman NA, Cash SS, Bianchi MT
2324+
link:
2325+
url: https://bdsp-core.github.io/cdac-downloads/2012_Westover_OpenMedInformJ_23304251.pdf
2326+
display: 'The open medical informatics journal. 2012. 6. 36-50. doi: 10.2174/1874431101206010036.
2327+
PMID: 23304251.'
2328+
highlight: 0
22322329
- title: '"Using electronic health data to explore effectiveness of ICU EEG and anti-seizure
22332330
treatment."'
22342331
image: ''

0 commit comments

Comments
 (0)