Skip to content

Commit 52e4614

Browse files
committed
Update data from Google Sheets and PubMed
1 parent 5e0e37c commit 52e4614

40 files changed

Lines changed: 12058 additions & 1 deletion

_data/repos.yml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -942,7 +942,7 @@
942942
language: HTML
943943
stars: 2
944944
forks: 5
945-
updated_at: '2026-05-18'
945+
updated_at: '2026-05-19'
946946
visibility: public
947947
category: Data Platforms & Infrastructure
948948
category_slug: data-platforms-infrastructure

_data/yamlHRV_ECG.yml

Lines changed: 131 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -2933,6 +2933,137 @@
29332933
url: https://bdsp-core.github.io/cdac-downloads/2020_Sun_Sleep_31863111.pdf
29342934
display: 'Sleep. 2020. 43(7). doi: 10.1093/sleep/zsz306. PMID: 31863111.'
29352935
highlight: 0
2936+
- title: '"Automatic Detection of General Anesthetic-States using ECG-Derived Autonomic
2937+
Nervous System Features."'
2938+
image: ''
2939+
description: ''
2940+
authors: Polk SL, Kashkooli K, Nagaraj SB, Chamadia S, Murphy JM, Sun H, Westover
2941+
MB, Barbieri R, Akeju O
2942+
link:
2943+
url: https://bdsp-core.github.io/cdac-downloads/2019_Polk_AnnuIntConfIEEEEngMedBiolSoc_31946297.pdf
2944+
display: 'Annual International Conference of the IEEE Engineering in Medicine
2945+
and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual
2946+
International Conference. 2019. 2019. 2019-2022. doi: 10.1109/EMBC.2019.8857704.
2947+
PMID: 31946297.'
2948+
highlight: 0
2949+
- title: '"You Snooze, You Win: the PhysioNet/Computing in Cardiology Challenge 2018."'
2950+
image: ''
2951+
description: ''
2952+
authors: Ghassemi MM, Moody BE, Lehman LH, Song C, Li Q, Sun H, Mark RG, Westover
2953+
MB, Clifford GD
2954+
link:
2955+
url: https://bdsp-core.github.io/cdac-downloads/2018_Ghassemi_ComputCardiol2010_34796237.pdf
2956+
display: 'Computing in cardiology. 2018. 45. doi: 10.22489/cinc.2018.049. PMID:
2957+
34796237.'
2958+
highlight: 0
2959+
- title: '"ADARRI: a novel method to detect spurious R-peaks in the electrocardiogram
2960+
for heart rate variability analysis in the intensive care unit."'
2961+
image: ''
2962+
description: ''
2963+
authors: Rebergen DJ, Nagaraj SB, Rosenthal ES, Bianchi MT, van Putten MJAM, Westover
2964+
MB
2965+
link:
2966+
url: https://bdsp-core.github.io/cdac-downloads/2018_Rebergen_JClinMonitComput_28210934.pdf
2967+
display: 'Journal of clinical monitoring and computing. 2018. 32(1). 53-61. doi:
2968+
10.1007/s10877-017-9999-9. PMID: 28210934.'
2969+
highlight: 0
2970+
- title: '"Patient-Specific Classification of ICU Sedation Levels From Heart Rate
2971+
Variability."'
2972+
image: ''
2973+
description: ''
2974+
authors: Nagaraj SB, Biswal S, Boyle EJ, Zhou DW, McClain LM, Bajwa EK, Quraishi
2975+
SA, Akeju O, Barbieri R, Purdon PL, Westover MB
2976+
link:
2977+
url: https://bdsp-core.github.io/cdac-downloads/2017_Nagaraj_CritCareMed_28441231.pdf
2978+
display: 'Critical care medicine. 2017. 45(7). e683-e690. doi: 10.1097/CCM.0000000000002364.
2979+
PMID: 28441231.'
2980+
highlight: 0
2981+
- title: '"Heart rate variability as a biomarker for sedation depth estimation in
2982+
ICU patients."'
2983+
image: ''
2984+
description: ''
2985+
authors: Nagaraj SB, Ramaswamy SM, Biswal S, Boyle EJ, Zhou DW, Mcclain LM, Rosenthal
2986+
ES, Purdon PL, Westover MB
2987+
link:
2988+
url: https://bdsp-core.github.io/cdac-downloads/2016_Nagaraj_AnnuIntConfIEEEEngMedBiolSoc_28269712.pdf
2989+
display: 'Annual International Conference of the IEEE Engineering in Medicine
2990+
and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual
2991+
International Conference. 2016. 2016. 6397-6400. doi: 10.1109/EMBC.2016.7592192.
2992+
PMID: 28269712.'
2993+
highlight: 0
2994+
- title: '"Automatic Classification of Sedation Levels in ICU Patients Using Heart
2995+
Rate Variability."'
2996+
image: ''
2997+
description: ''
2998+
authors: Nagaraj SB, McClain LM, Zhou DW, Biswal S, Rosenthal ES, Purdon PL, Westover
2999+
MB
3000+
link:
3001+
url: https://bdsp-core.github.io/cdac-downloads/2016_Nagaraj_CritCareMed_27035240.pdf
3002+
display: 'Critical care medicine. 2016. 44(9). e782-9. doi: 10.1097/CCM.0000000000001708.
3003+
PMID: 27035240.'
3004+
highlight: 0
3005+
- title: '"Classification algorithms for predicting sleepiness and sleep apnea severity."'
3006+
image: ''
3007+
description: ''
3008+
authors: Eiseman NA, Westover MB, Mietus JE, Thomas RJ, Bianchi MT
3009+
link:
3010+
url: https://bdsp-core.github.io/cdac-downloads/2012_Eiseman_JSleepRes_21752133.pdf
3011+
display: 'Journal of sleep research. 2012. 21(1). 101-12. doi: 10.1111/j.1365-2869.2011.00935.x.
3012+
PMID: 21752133.'
3013+
highlight: 0
3014+
- title: '"The Harvard-Emory ECG Database."'
3015+
image: ''
3016+
description: ''
3017+
authors: Koscova Z, Li Q, Robichaux C, Junior VM, Ghanta M, Gupta A, Rosand J, Aguirre
3018+
AD, Reinertsen E, Song S, Hong S, Albert DE, Xue J, Parekh A, Sameni R, Reyna
3019+
MA, Westover MB, Clifford GD
3020+
link:
3021+
url: https://bdsp-core.github.io/cdac-downloads/2026_Koscova_SciData_41741499.pdf
3022+
display: 'Scientific data. 2026. 13(1). doi: 10.1038/s41597-026-06861-9. PMID:
3023+
41741499.'
3024+
highlight: 0
3025+
- title: '"An Electrocardiogram Foundation Model Built on over 10 Million Recordings."'
3026+
image: ''
3027+
description: ''
3028+
authors: Li J, Aguirre AD, Moura V, Jin J, Liu C, Zhong L, Sun C, Clifford G, Westover
3029+
MB, Hong S
3030+
link:
3031+
url: https://bdsp-core.github.io/cdac-downloads/2025_Li_NEJMAI_40771651.pdf
3032+
display: 'NEJM AI. 2025. 2(7). doi: 10.1056/aioa2401033. PMID: 40771651.'
3033+
highlight: 0
3034+
- title: '"The Harvard-Emory ECG Database."'
3035+
image: ''
3036+
description: ''
3037+
authors: Koscova Z, Li Q, Robichaux C, Junior VM, Ghanta M, Gupta A, Rosand J, Aguirre
3038+
A, Hong S, Albert DE, Xue J, Parekh A, Sameni R, Reyna MA, Westover MB, Cliford
3039+
GD
3040+
link:
3041+
url: https://bdsp-core.github.io/cdac-downloads/2025_Koscova_medRxiv_40385443.pdf
3042+
display: 'medRxiv : the preprint server for health sciences. 2025. doi: 10.1101/2024.09.27.24314503.
3043+
PMID: 40385443.'
3044+
highlight: 0
3045+
- title: '"Sleep staging in the ICU with heart rate variability and breathing signals.
3046+
An exploratory cross-sectional study using deep neural networks."'
3047+
image: ''
3048+
description: ''
3049+
authors: Ganglberger W, Krishnamurthy PV, Quadri SA, Tesh RA, Bucklin AA, Adra N,
3050+
Da Silva Cardoso M, Leone MJ, Hemmige A, Rajan S, Panneerselvam E, Paixao L, Higgins
3051+
J, Ayub MA, Shao YP, Coughlin B, Sun H, Ye EM, Cash SS, Thompson BT, Akeju O,
3052+
Kuller D, Thomas RJ, Westover MB
3053+
link:
3054+
url: https://bdsp-core.github.io/cdac-downloads/2023_Ganglberger_FrontNetwPhysiol_36926545.pdf
3055+
display: 'Frontiers in network physiology. 2023. 3. 1120390. doi: 10.3389/fnetp.2023.1120390.
3056+
PMID: 36926545.'
3057+
highlight: 0
3058+
- title: '"Sleep staging from electrocardiography and respiration with deep learning."'
3059+
image: ''
3060+
description: ''
3061+
authors: Sun H, Ganglberger W, Panneerselvam E, Leone MJ, Quadri SA, Goparaju B,
3062+
Tesh RA, Akeju O, Thomas RJ, Westover MB
3063+
link:
3064+
url: https://bdsp-core.github.io/cdac-downloads/2020_Sun_Sleep_31863111.pdf
3065+
display: 'Sleep. 2020. 43(7). doi: 10.1093/sleep/zsz306. PMID: 31863111.'
3066+
highlight: 0
29363067
- title: '"You Snooze, You Win: the PhysioNet/Computing in Cardiology Challenge 2018."'
29373068
image: ''
29383069
description: ''

_data/yamlICUEEGterminology.yml

Lines changed: 97 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -2132,6 +2132,103 @@
21322132
display: 'The open medical informatics journal. 2012. 6. 36-50. doi: 10.2174/1874431101206010036.
21332133
PMID: 23304251.'
21342134
highlight: 0
2135+
- title: '"Evaluating crowdsourcing for ICU EEG annotation: A comparison with expert
2136+
performance."'
2137+
image: ''
2138+
description: ''
2139+
authors: Kong WY, Nascimento FA, Struck A, Duhaime E, Kapur S, Amorim E, Kapinos
2140+
G, Rodriguez A, Thomas B, Desai M, Lee JW, Westover MB, Jing J
2141+
link:
2142+
url: https://bdsp-core.github.io/cdac-downloads/2025_Kong_Unknown_40768345.pdf
2143+
display: 'Epilepsia. 2025. 66(11). 4366-4380. doi: 10.1111/epi.18547. PMID: 40768345.'
2144+
highlight: 0
2145+
- title: '"Systematic Evaluation of Research Priorities in Critical Care Electroencephalography."'
2146+
image: ''
2147+
description: ''
2148+
authors: Sheikh Z, Selioutski O, Taraschenko O, Gilmore EJ, Westover MB, Cohen AB
2149+
link:
2150+
url: https://bdsp-core.github.io/cdac-downloads/2022_Sheikh_JClinNeurophysiol_35066530.pdf
2151+
display: 'Journal of clinical neurophysiology : official publication of the American
2152+
Electroencephalographic Society. 2023. 40(5). 426-433. doi: 10.1097/WNP.0000000000000916.
2153+
PMID: 35066530.'
2154+
highlight: 0
2155+
- title: '"Using electronic health data to explore effectiveness of ICU EEG and anti-seizure
2156+
treatment."'
2157+
image: ''
2158+
description: ''
2159+
authors: Amerineni R, Sun H, Lee H, Hsu J, Patorno E, Westover MB, Zafar SF
2160+
link:
2161+
url: https://bdsp-core.github.io/cdac-downloads/2021_Amerineni_AnnClinTranslNeurol_34802196.pdf
2162+
display: 'Annals of clinical and translational neurology. 2021. 8(12). 2270-2279.
2163+
doi: 10.1002/acn3.51478. PMID: 34802196.'
2164+
highlight: 0
2165+
- title: '"American Clinical Neurophysiology Society''s Standardized Critical Care
2166+
EEG Terminology: 2021 Version."'
2167+
image: ''
2168+
description: ''
2169+
authors: Hirsch LJ, Fong MWK, Leitinger M, LaRoche SM, Beniczky S, Abend NS, Lee
2170+
JW, Wusthoff CJ, Hahn CD, Westover MB, Gerard EE, Herman ST, Haider HA, Osman
2171+
G, Rodriguez-Ruiz A, Maciel CB, Gilmore EJ, Fernandez A, Rosenthal ES, Claassen
2172+
J, Husain AM, Yoo JY, So EL, Kaplan PW, Nuwer MR, van Putten M, Sutter R, Drislane
2173+
FW, Trinka E, Gaspard N
2174+
link:
2175+
url: https://bdsp-core.github.io/cdac-downloads/2021_Hirsch_JClinNeurophysiol_33475321.pdf
2176+
display: 'Journal of clinical neurophysiology : official publication of the American
2177+
Electroencephalographic Society. 2021. 38(1). 1-29. doi: 10.1097/WNP.0000000000000806.
2178+
PMID: 33475321.'
2179+
highlight: 0
2180+
- title: '"Development and Feasibility Testing of a Critical Care EEG Monitoring Database
2181+
for Standardized Clinical Reporting and Multicenter Collaborative Research."'
2182+
image: ''
2183+
description: ''
2184+
authors: Lee JW, LaRoche S, Choi H, Rodriguez Ruiz AA, Fertig E, Politsky JM, Herman
2185+
ST, Loddenkemper T, Sansevere AJ, Korb PJ, Abend NS, Goldstein JL, Sinha SR, Dombrowski
2186+
KE, Ritzl EK, Westover MB, Gavvala JR, Gerard EE, Schmitt SE, Szaflarski JP, Ding
2187+
K, Haas KF, Buchsbaum R, Hirsch LJ, Wusthoff CJ, Hopp JL, Hahn CD
2188+
link:
2189+
url: https://bdsp-core.github.io/cdac-downloads/2016_Lee_JClinNeurophysiol_26943901.pdf
2190+
display: 'Journal of clinical neurophysiology : official publication of the American
2191+
Electroencephalographic Society. 2016. 33(2). 133-40. doi: 10.1097/WNP.0000000000000230.
2192+
PMID: 26943901.'
2193+
highlight: 0
2194+
- title: '"The standardization debate: A conflation trap in critical care electroencephalography."'
2195+
image: ''
2196+
description: ''
2197+
authors: Ng MC, Gaspard N, Cole AJ, Hoch DB, Cash SS, Bianchi M, O'Rourke DA, Rosenthal
2198+
ES, Chu CJ, Westover MB
2199+
link:
2200+
url: https://bdsp-core.github.io/cdac-downloads/2015_Ng_Seizure_25457454.pdf
2201+
display: 'Seizure. 2015. 24. 52-8. doi: 10.1016/j.seizure.2014.09.017. PMID: 25457454.'
2202+
highlight: 0
2203+
- title: '"Interrater agreement for Critical Care EEG Terminology."'
2204+
image: ''
2205+
description: ''
2206+
authors: Gaspard N, Hirsch LJ, LaRoche SM, Hahn CD, Westover MB
2207+
link:
2208+
url: https://bdsp-core.github.io/cdac-downloads/2014_Gaspard_Epilepsia_24888711.pdf
2209+
display: 'Epilepsia. 2014. 55(9). 1366-73. doi: 10.1111/epi.12653. PMID: 24888711.'
2210+
highlight: 0
2211+
- title: '"Real-time segmentation and tracking of brain metabolic state in ICU EEG
2212+
recordings of burst suppression."'
2213+
image: ''
2214+
description: ''
2215+
authors: Westover MB, Ching S, Shafi MM, Cash SS, Brown EN
2216+
link:
2217+
url: https://bdsp-core.github.io/cdac-downloads/2013_Westover_AnnuIntConfIEEEEngMedBiolSoc_24111383.pdf
2218+
display: 'Annual International Conference of the IEEE Engineering in Medicine
2219+
and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual
2220+
International Conference. 2013. 2013. 7108-11. doi: 10.1109/EMBC.2013.6611196.
2221+
PMID: 24111383.'
2222+
highlight: 0
2223+
- title: '"Information theoretic quantification of diagnostic uncertainty."'
2224+
image: ''
2225+
description: ''
2226+
authors: Westover MB, Eiseman NA, Cash SS, Bianchi MT
2227+
link:
2228+
url: https://bdsp-core.github.io/cdac-downloads/2012_Westover_OpenMedInformJ_23304251.pdf
2229+
display: 'The open medical informatics journal. 2012. 6. 36-50. doi: 10.2174/1874431101206010036.
2230+
PMID: 23304251.'
2231+
highlight: 0
21352232
- title: '"Using electronic health data to explore effectiveness of ICU EEG and anti-seizure
21362233
treatment."'
21372234
image: ''

0 commit comments

Comments
 (0)