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[pre-commit.ci] auto fixes from pre-commit.com hooks
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Lines changed: 8 additions & 13 deletions

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phys2cvr/workflows.py

Lines changed: 8 additions & 13 deletions
Original file line numberDiff line numberDiff line change
@@ -479,26 +479,22 @@ def phys2cvr(
479479
if lag_map:
480480
lag, _, _ = io.load_nifti_get_mask(lag_map)
481481
if func.shape[:3] != lag.shape:
482-
raise ValueError(
483-
f'{lag_map} and {fname_func} have different sizes!'
484-
)
482+
raise ValueError(f'{lag_map} and {fname_func} have different sizes!')
485483

486484
# Read lag_step and lag_max from file (or try to)
487485
lag = lag * mask
488-
486+
489487
lag_list = np.unique(lag[mask > 0])
490488

491489
if lag_step is None:
492-
lag_step = np.unique(np.round(lag_list[1:] - lag_list[:-1],3))
490+
lag_step = np.unique(np.round(lag_list[1:] - lag_list[:-1], 3))
493491
if lag_step.size > 1:
494492
raise ValueError(
495493
f'phys2cvr found different delta lags in {lag_map}'
496494
)
497495
else:
498-
lag_step=lag_step[0]
499-
LGR.warning(
500-
f'phys2cvr detected a delta lag of {lag_step} seconds'
501-
)
496+
lag_step = lag_step[0]
497+
LGR.warning(f'phys2cvr detected a delta lag of {lag_step} seconds')
502498
else:
503499
LGR.warning(f'Forcing delta lag to be {lag_step}')
504500

@@ -634,20 +630,19 @@ def phys2cvr(
634630

635631
# If user specified a lag map, use that one to regress things
636632
if lag_map:
637-
638633
lag_idx = np.round((lag + lag_max) * freq / step).astype(int)
639634
lag_idx_list = np.unique(lag_idx)
640-
635+
641636
# Prepare empty matrices
642637
beta = np.empty_like(lag, dtype='float32')
643638
tstat = np.empty_like(lag, dtype='float32')
644-
639+
645640
for index, i in enumerate(lag_idx_list):
646641
LGR.info(f'Perform L-GLM number {index + 1} of {len(lag_idx_list)}')
647642
regr = regr_shifts[(i * step), :, np.newaxis]
648643

649644
x1D = os.path.join(outdir, 'mat', f'mat_{i:04g}.1D')
650-
645+
651646
(beta[lag_idx == i], tstat[lag_idx == i], _) = stats.regression(
652647
func[lag_idx == i],
653648
regr,

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