diff --git a/Cargo.lock b/Cargo.lock index de2e9af4..bd1312d1 100644 --- a/Cargo.lock +++ b/Cargo.lock @@ -1309,7 +1309,7 @@ dependencies = [ "indicatif", "log", "lz4_flex 0.12.1", - "noodles-core 0.16.0", + "noodles-core 0.19.0", "noodles-fasta", "noodles-vcf 0.80.0 (git+https://github.com/biodatageeks/noodles.git?rev=9b7b2c5b6531373918302d4c07410e583f1b5b5c)", "parquet", @@ -3413,6 +3413,15 @@ dependencies = [ "bstr", ] +[[package]] +name = "noodles-core" +version = "0.19.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "53e1e8a419dbba0e4000b0e60830b124138c7f2277ad556463506f1a81d32d17" +dependencies = [ + "bstr", +] + [[package]] name = "noodles-cram" version = "0.79.0" diff --git a/datafusion/bio-function-vep/Cargo.toml b/datafusion/bio-function-vep/Cargo.toml index 73f3b9f7..6daed2dd 100644 --- a/datafusion/bio-function-vep/Cargo.toml +++ b/datafusion/bio-function-vep/Cargo.toml @@ -22,7 +22,7 @@ ahash = { version = "0.8.6", optional = true } flate2 = "1.1.0" coitrees = "0.4.0" serde_json = "1" -noodles-core = "0.16" +noodles-core = "0.19" noodles-fasta = "0.49" parquet = { version = "56", features = ["arrow"] } datafusion-bio-format-vcf = { git = "https://github.com/biodatageeks/datafusion-bio-formats.git", rev = "5fc6a6fc26c4300402d9283d69d9d521e96abc60" }