PorousMediaLab/pyproject.toml at master · biogeochemistry/PorousMediaLab · GitHub

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[tool.poetry]
name = "porousmedialab"
version = "2.1.1"
description = "Toolbox for batch and 1D reactive transport modeling in porous media aimed on easiness of use for the user without computational background"
authors = ["Igor Markelov <is.markelov@gmail.com>"]
license = "MIT"
readme = "README.md"
repository = "https://github.com/biogeochemistry/PorousMediaLab"
keywords = ["modeling", "reactive", "transport", "diffusion", "advection"]
packages = [{include = "porousmedialab"}]
classifiers = [
    "Development Status :: 4 - Beta",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Topic :: Scientific/Engineering :: Physics",
    "Topic :: Scientific/Engineering :: Chemistry",
]

[tool.poetry.dependencies]
python = "^3.10"
numpy = ">=1.20,<3"
numexpr = ">=2.7"
scipy = ">=1.10"
matplotlib = ">=3.4"
seaborn = ">=0.11"
h5py = ">=3.0"
scikit-learn = ">=1.0"

[tool.poetry.group.dev.dependencies]
cython = "^3.0"
pytest = "^7.0"
pytest-cov = "^4.0"
jupyter = "^1.1.1"
nbconvert = "^7.17.0"

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"

[tool.pytest.ini_options]
testpaths = ["tests"]
python_files = ["test_*.py"]
python_classes = ["Test*"]
python_functions = ["test_*"]
addopts = "-v --tb=short"
filterwarnings = [
    "ignore::DeprecationWarning",
    "ignore::PendingDeprecationWarning",
]
markers = [
    "slow: marks tests as slow (deselect with '-m \"not slow\"')",
    "integration: marks tests as integration tests",
]

[tool.coverage.run]
source = ["porousmedialab"]
branch = true
omit = ["tests/*", "examples/*"]

[tool.coverage.report]
exclude_lines = [
    "pragma: no cover",
    "def __repr__",
    "raise NotImplementedError",
]