acknowledgement

Author: stevencarlislewalker

CITATION.cff

@@ -18,6 +18,12 @@ authors:
   - family-names: "Flynn-Primrose"
     given-names: "Darren"
     roles: ["author"]
+  - family-names: "Earn"
+    given-names: "David J.D."
+    roles: ["contributor"]
+  - family-names: "Dushoff"
+    given-names: "Jonathan"
+    roles: ["contributor"]
   - family-names: "Zhao"
     given-names: "Kevin"
     roles: ["contributor"]
@@ -34,7 +40,7 @@ keywords:
   - epidemiological modeling
   - infectious disease dynamics
   - compartmental models
-description: "Fast and flexible compartmental modelling with Template Model Builder."
+description: "Fast and flexible Compartmental Modelling."
 references:
   - type: "software"
     title: "macpan2: Fast and Flexible Compartmental Modelling"
@@ -55,6 +61,12 @@ references:
       - family-names: "Flynn-Primrose"
         given-names: "Darren"
         roles: ["author"]
+      - family-names: "Earn"
+        given-names: "David J.D."
+        roles: ["contributor"]
+      - family-names: "Dushoff"
+        given-names: "Jonathan"
+        roles: ["contributor"]
       - family-names: "Zhao"
         given-names: "Kevin"
         roles: ["contributor"]

CONTRIBUTING.md

@@ -16,6 +16,7 @@ Developers can see [here](https://canmod.github.io/macpan2/articles/index.html#d
 - [Changelog Management](#changelog-management)
 - [Testing Installability of Specific Commits](#testing-installability-of-specific-commits)
 - [Log Files](#log-files)
+- [Version Release](#version-release)
 
 
 ## Developer Installation
@@ -224,3 +225,8 @@ Please do not check in this generated `install-tests.txt` file.
 ## Log Files
 
 Every simulation generates or overwrites a log file. The default location is described  [here](https://canmod.github.io/macpan2/articles/options.html). The path of the log file is created when the simulator is created. So if the simulator is saved to a file (e.g., stored with `saveRDS`), there is a risk that when it is reloaded the path to the log file will no longer exist. If this happens `macpan2` will try to recreate it, but this might fail. If the log file path is not valid for any of these reasons, the log file will be written to `.macpan2/bail-out/log.txt` in the current working directory. Log files are used internally by `macpan2` when producing error messages that originate within an [engine function](https://canmod.github.io/macpan2/reference/engine_functions.html). This mechanism of getting messages from `C++` to `R` is not ideal, but provides a workaround for the limitation that TMB cannot report back strings (I would welcome being wrong so that we could simplify this part of the code).
+
+
+## Version Release
+
+

DESCRIPTION

@@ -1,13 +1,15 @@
 Package: macpan2
 Title: Fast and Flexible Compartmental Modelling
-Version: 3.5.0
+Version: 3.5.1
 Authors@R: c(
-  person("Steve Walker", email="stevencarlislewalker@gmail.com", role=c("cre", "aut")),
+  person("Steve Walker", email="stevencarlislewalker@gmail.com", role=c("cre", "aut"), comment = c(ORCID = "0000-0002-4394-9078"),
   person("Weiguang Guan", role="aut"),
   person("Jen Freeman", role="aut"),
-  person("Ben Bolker", role="aut"),
+  person("Ben Bolker", role="aut", comment = c(ORCID = "0000-0002-2127-0443"),
   person("Darren Flynn-Primrose", role="aut"),
-  person("Irena Papst", role="ctb"),
+  person("David J.D. Earn", rol="ctb", comment = c(ORCID = "0000-0002-7562-1341"),
+  person("Jonathan Dushoff", rol="ctb", comment = c(ORCID = "0000-0003-0506-4794"),
+  person("Irena Papst", role="ctb", comment = c(ORCID = "0000-0001-5901-7585"),
   person("Michael Li", role="ctb"),
   person("Kevin Zhao", role="ctb"))
 Description: Tools for building and calibrating compartmental models of infectious disease.