update standalone algorithm by considering the devsimpy directory structure

Author: capocchi

devsimpy/StandaloneNoGUI.py

@@ -127,7 +127,7 @@ def __init__(self, yaml:str="", outfn:str="devsimpy-nogui-pkg.zip", format:str="
 
         ### if simulation kernel need to by zipped
         if self.add_sim_kernel:
-            StandaloneNoGUI.DIRNAMES.append('DEVSKernel/')    
+            StandaloneNoGUI.DIRNAMES.append('DEVSKernel/')
 
     def GetDockerSpec(self):
         """
@@ -187,7 +187,7 @@ def BuildZipPackage(self) -> None:
             if self.add_sim_kernel:
                 ### add all dependencies python files needed to execute devsimpy-nogui
                 for fn in StandaloneNoGUI.FILENAMES:
-                    archive.write(fn)
+                    archive.write(os.path.join('devsimpy',fn), arcname=fn)
 
             ###################################################################
             ###
@@ -245,6 +245,8 @@ def BuildZipPackage(self) -> None:
                 ### add all dependancies (directories) needed to execute devsimpy-nogui
                 for dirname in self.dirnames_abs:
 
+                    dirname = os.path.join('devsimpy', dirname)
+
                     # Call the function to retrieve all files and folders of the assigned directory
                     filePaths = retrieve_file_paths(dirname)
 
@@ -258,7 +260,7 @@ def BuildZipPackage(self) -> None:
 
                     for file in filePaths:
                         if '__pycache__' not in file:
-                            archive.write(file)
+                            archive.write(file, arcname=file.split('devsimpy')[1])
 
                 ###################################################################
                 ###