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SFJohnson24SFJohnson24
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remove file extension (#38)
* remove file extension * uppercase
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913 files changed

Lines changed: 9808 additions & 9737 deletions

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‎.github/scripts/convert_results.py‎

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@@ -29,7 +29,7 @@ def convert_nonusdm(issue_details: list) -> tuple[list[str], list[tuple]]:
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header = ["Dataset", "Record", "Variable", "Value"]
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rows = []
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for issue in issue_details:
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dataset = issue.get("dataset", "")
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dataset = issue.get("dataset", "").removesuffix(".csv")
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record = str(issue.get("row", ""))
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variables = issue.get("variables") or []
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values = issue.get("values") or []

‎Published/CORE-000001/negative/01/results/results.csv‎

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Dataset,Record,Variable,Value
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ie.csv,1,IECAT,INCLUSION
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ie.csv,1,IEORRES,Y
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ie.csv,2,IECAT,INCLUSION
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ie.csv,2,IEORRES,Yes
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ie.csv,3,IECAT,INCLUSION
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ie.csv,3,IEORRES,Nope
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IE,1,IECAT,INCLUSION
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IE,1,IEORRES,Y
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IE,2,IECAT,INCLUSION
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IE,2,IEORRES,Yes
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IE,3,IECAT,INCLUSION
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IE,3,IEORRES,Nope

‎Published/CORE-000003/negative/01/results/results.csv‎

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Dataset,Record,Variable,Value
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TR.csv,1,TRLOC,
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TR.csv,2,TRLOC,LIVER
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TR.csv,3,TRLOC,KIDNEY
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TR.csv,4,TRLOC,CERVICAL LYMPH NODE
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TR.csv,5,TRLOC,SKIN OF THE TRUNK
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TR.csv,6,TRLOC,LIVER
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TR.csv,7,TRLOC,KIDNEY
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TR.csv,8,TRLOC,CERVICAL LYMPH NODE
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TR.csv,9,TRLOC,SKIN OF THE TRUNK
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TR.csv,10,TRLOC,SKIN OF THE TRUNK
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TR.csv,11,TRLOC,LIVER
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TR.csv,12,TRLOC,KIDNEY
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TR.csv,13,TRLOC,CERVICAL LYMPH NODE
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TR.csv,14,TRLOC,SKIN OF THE TRUNK
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TR.csv,15,TRLOC,
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TR.csv,16,TRLOC,
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TR.csv,17,TRLOC,
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TR.csv,18,TRLOC,
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TR.csv,19,TRLOC,
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TR.csv,20,TRLOC,
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TR.csv,21,TRLOC,
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TR.csv,22,TRLOC,THYROID GLAND
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TR.csv,23,TRLOC,CEREBELLUM
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TR.csv,24,TRLOC,THYROID GLAND
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TR.csv,25,TRLOC,CEREBELLUM
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TR.csv,26,TRLOC,THYROID GLAND
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TR.csv,27,TRLOC,CEREBELLUM
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TR,1,TRLOC,
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TR,2,TRLOC,LIVER
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TR,3,TRLOC,KIDNEY
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TR,4,TRLOC,CERVICAL LYMPH NODE
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TR,5,TRLOC,SKIN OF THE TRUNK
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TR,6,TRLOC,LIVER
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TR,7,TRLOC,KIDNEY
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TR,8,TRLOC,CERVICAL LYMPH NODE
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TR,9,TRLOC,SKIN OF THE TRUNK
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TR,10,TRLOC,SKIN OF THE TRUNK
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TR,11,TRLOC,LIVER
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TR,12,TRLOC,KIDNEY
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TR,13,TRLOC,CERVICAL LYMPH NODE
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TR,14,TRLOC,SKIN OF THE TRUNK
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TR,15,TRLOC,
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TR,16,TRLOC,
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TR,17,TRLOC,
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TR,18,TRLOC,
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TR,19,TRLOC,
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TR,20,TRLOC,
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TR,21,TRLOC,
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TR,22,TRLOC,THYROID GLAND
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TR,23,TRLOC,CEREBELLUM
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TR,24,TRLOC,THYROID GLAND
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TR,25,TRLOC,CEREBELLUM
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TR,26,TRLOC,THYROID GLAND
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TR,27,TRLOC,CEREBELLUM

‎Published/CORE-000003/negative/02/results/results.csv‎

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@@ -1,28 +1,28 @@
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Dataset,Record,Variable,Value
2-
TR.csv,1,TRLOC,
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TR.csv,2,TRLOC,
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TR.csv,3,TRLOC,
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TR.csv,4,TRLOC,
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TR.csv,5,TRLOC,
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TR.csv,6,TRLOC,
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TR.csv,7,TRLOC,
9-
TR.csv,8,TRLOC,
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TR.csv,9,TRLOC,
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TR.csv,10,TRLOC,
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TR.csv,11,TRLOC,
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TR.csv,12,TRLOC,
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TR.csv,13,TRLOC,
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TR.csv,14,TRLOC,
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TR.csv,15,TRLOC,
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TR.csv,16,TRLOC,
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TR.csv,17,TRLOC,
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TR.csv,18,TRLOC,
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TR.csv,19,TRLOC,
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TR.csv,20,TRLOC,
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TR.csv,21,TRLOC,
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TR.csv,22,TRLOC,
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TR.csv,23,TRLOC,
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TR.csv,24,TRLOC,
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TR.csv,25,TRLOC,
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TR.csv,26,TRLOC,
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TR.csv,27,TRLOC,
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TR,1,TRLOC,
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TR,2,TRLOC,
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TR,3,TRLOC,
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TR,4,TRLOC,
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TR,5,TRLOC,
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TR,6,TRLOC,
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TR,7,TRLOC,
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TR,8,TRLOC,
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TR,9,TRLOC,
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TR,10,TRLOC,
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TR,11,TRLOC,
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TR,12,TRLOC,
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TR,13,TRLOC,
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TR,14,TRLOC,
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TR,15,TRLOC,
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TR,16,TRLOC,
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TR,17,TRLOC,
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TR,18,TRLOC,
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TR,19,TRLOC,
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TR,20,TRLOC,
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TR,21,TRLOC,
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TR,22,TRLOC,
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TR,23,TRLOC,
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TR,24,TRLOC,
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TR,25,TRLOC,
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TR,26,TRLOC,
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TR,27,TRLOC,

‎Published/CORE-000004/negative/01/results/results.csv‎

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@@ -1,3 +1,3 @@
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Dataset,Record,Variable,Value
2-
EC.csv,7,ECDOSE,0
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EC.csv,7,ECOCCUR,N
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EC,7,ECDOSE,0
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EC,7,ECOCCUR,N

‎Published/CORE-000006/negative/01/results/results.csv‎

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@@ -1,4 +1,4 @@
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Dataset,Record,Variable,Value
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DM.csv,1,DTHFL,N
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DM.csv,2,DTHFL,U
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DM.csv,4,DTHFL,N
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DM,1,DTHFL,N
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DM,2,DTHFL,U
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DM,4,DTHFL,N

‎Published/CORE-000007/negative/01/results/results.csv‎

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Dataset,Record,Variable,Value
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DM.csv,3,DTHDTC,2018-06-10
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DM.csv,3,DTHFL,
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DM.csv,3,USUBJID,015246-099-0000-00002
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DM.csv,4,DTHDTC,2018-09-04
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DM.csv,4,DTHFL,N
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DM.csv,4,USUBJID,015246-099-0000-00003
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DM,3,DTHDTC,2018-06-10
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DM,3,DTHFL,
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DM,3,USUBJID,015246-099-0000-00002
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DM,4,DTHDTC,2018-09-04
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DM,4,DTHFL,N
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DM,4,USUBJID,015246-099-0000-00003

‎Published/CORE-000007/negative/02/results/results.csv‎

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Dataset,Record,Variable,Value
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dm.csv,4,DTHDTC,2018-12-11
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dm.csv,4,DTHFL,
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DM,4,DTHDTC,2018-12-11
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DM,4,DTHFL,

‎Published/CORE-000008/negative/01/results/results.csv‎

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Dataset,Record,Variable,Value
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DM.csv,1,DTHFL,
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DM.csv,1,SSSTRESC,DEAD
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DM.csv,2,DTHFL,N
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DM.csv,2,SSSTRESC,DEAD
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DM,1,DTHFL,
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DM,1,SSSTRESC,DEAD
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DM,2,DTHFL,N
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DM,2,SSSTRESC,DEAD

‎Published/CORE-000010/negative/01/results/results.csv‎

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Dataset,Record,Variable,Value
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DM.csv,1,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM.csv,2,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM.csv,3,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM.csv,5,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM.csv,6,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM.csv,7,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM.csv,10,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM.csv,11,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM.csv,14,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM.csv,16,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM.csv,17,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM.csv,18,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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TA.csv,3,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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TA.csv,4,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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TA.csv,5,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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TA.csv,6,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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TA.csv,7,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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TA.csv,8,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM,1,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM,2,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM,3,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM,5,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM,6,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM,7,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM,10,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM,11,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM,14,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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DM,16,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM,17,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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DM,18,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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TA,3,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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TA,4,ARMCD,ZANOMALINE_LOW_DOSE_54_mg
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TA,5,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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TA,6,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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TA,7,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg
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TA,8,ARMCD,ZANOMALINE_HIGH_DOSE_81_mg

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