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21 changes: 1 addition & 20 deletions .github/workflows/ci-tests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -85,14 +85,6 @@ jobs:
- name: Test with tox
run: APPTAINER_TMPDIR=${RUNNER_TEMP} tox

- name: Upload coverage to Codecov
if: ${{ matrix.step == 'unit' }}
uses: codecov/codecov-action@e79a6962e0d4c0c17b229090214935d2e33f8354 # v6
with:
fail_ci_if_error: true
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

tox-style:
name: Linters
runs-on: ubuntu-24.04
Expand Down Expand Up @@ -228,12 +220,6 @@ jobs:
name: cwl-${{ matrix.cwl-version }}-${{ matrix.container }}${{ matrix.extras }}-conformance-results
path: |
**/cwltool_conf*.xml
- name: Upload coverage to Codecov
uses: codecov/codecov-action@e79a6962e0d4c0c17b229090214935d2e33f8354 # v6
with:
fail_ci_if_error: true
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
release_test:
name: cwltool release test
runs-on: ubuntu-24.04
Expand Down Expand Up @@ -317,9 +303,4 @@ jobs:
# uses: docker-practice/actions-setup-docker@master
- name: Test with tox
run: tox
- name: Upload coverage to Codecov
uses: codecov/codecov-action@e79a6962e0d4c0c17b229090214935d2e33f8354 # v6
with:
fail_ci_if_error: true
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

4 changes: 2 additions & 2 deletions cwltool/command_line_tool.py
Original file line number Diff line number Diff line change
Expand Up @@ -259,8 +259,8 @@ def revmap_file(
f["location"] = builder.fs_access.join(outdir, f["location"])
return f

if is_file(f) and "dirname" in f:
del f["dirname"]
if "dirname" in f:
del f["dirname"] # type: ignore[typeddict-item]

if "path" in f:
path = builder.fs_access.join(builder.outdir, f["path"])
Expand Down
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