Upstream Measure Processor, ApplyScoringMembership configuration option (#663)

* upstream library evaluate into processor, work around baseMeasureEvaluation class

* apply scoring parameter added to allow for raw cql results in MEasureReport

* applyScoring configuration

* dstu3 measure processor enhancements

* updating dependencies of measure processor classes

* sonarQube fixes

* sonar cube fixes

* fix supression

* fix compiling error on Variable

Author: Capt-Mac

cqf-fhir-cr/src/main/java/org/opencds/cqf/fhir/cr/measure/MeasureEvaluationOptions.java

@@ -12,6 +12,7 @@ public static MeasureEvaluationOptions defaultOptions() {
         return options;
     }
 
+    private boolean applyScoringSetMembership = true;
     private boolean isValidationEnabled = false;
     private Map<String, ValidationProfile> validationProfiles = new HashMap<>();
     private SubjectProviderOptions subjectProviderOptions;
@@ -51,4 +52,13 @@ public SubjectProviderOptions getSubjectProviderOptions() {
         }
         return subjectProviderOptions;
     }
+
+    public MeasureEvaluationOptions setApplyScoringSetMembership(boolean applyScoringSetMembership) {
+        this.applyScoringSetMembership = applyScoringSetMembership;
+        return this;
+    }
+
+    public boolean getApplyScoringSetMembership() {
+        return this.applyScoringSetMembership;
+    }
 }