Merge pull request #103 from databio/dev

Release 0.14.5

Author: khoroshevskyi

bbconf/_version.py

@@ -1 +1 @@
-__version__ = "0.14.4"
+__version__ = "0.14.5"

bbconf/modules/bedfiles.py

@@ -1476,6 +1476,13 @@ def reindex_qdrant(self, batch: int = 100, purge: bool = False) -> None:
                         bed_region_set_obj = GRegionSet(bb_client.seek(record.id))
                     except FileNotFoundError:
                         bed_region_set_obj = bb_client.load_bed(record.id)
+                    except RuntimeError:
+                        bed_region_set_obj = bb_client.load_bed(record.id)
+                    except Exception:
+                        _LOGGER.warning(
+                            f"File not found or corrupted. Skipping.. {record.id}"
+                        )
+                        continue
 
                     pbar.set_description(f"Processing file: {record.id}")