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Release 0.12.0 #92

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Merged
khoroshevskyi merged 31 commits into from
Sep 11, 2025
Merged

Release 0.12.0 #92

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c5dd331
Added more stats in comprehensive stats
khoroshevskyi Jun 24, 2025
85ba7d0
added more statistics about data in comprehensive stats
khoroshevskyi Jun 24, 2025
01d4d16
new qdrant search added
khoroshevskyi Jun 26, 2025
6ca3aed
Fixed qdrant filtering and added list assays function
khoroshevskyi Jun 27, 2025
3cadafb
Added more plots and statistics
khoroshevskyi Jun 30, 2025
b230770
search improvements
khoroshevskyi Jul 1, 2025
5c61b5c
Fixed update bed file method
khoroshevskyi Jul 18, 2025
4ad46d0
Added docstring and cleaning
khoroshevskyi Jul 18, 2025
4647d4d
updated reindexing
khoroshevskyi Jul 18, 2025
8d963e5
updated text for embeddings
khoroshevskyi Jul 21, 2025
8ebed01
Added option to not include metadata in search results
khoroshevskyi Jul 21, 2025
f9cea35
removed old semantic search and renamed search method
khoroshevskyi Jul 21, 2025
adc4116
fixed uploading to semantic search qdarnt
khoroshevskyi Aug 7, 2025
4f4e55d
updated bivec search
khoroshevskyi Aug 13, 2025
e4fe8aa
reference genome compat updates
khoroshevskyi Aug 13, 2025
0846e15
updated reindexing method
khoroshevskyi Aug 13, 2025
31f02bc
improved ref compatibility update
khoroshevskyi Aug 18, 2025
1069092
Fixed qdrant connection
khoroshevskyi Aug 18, 2025
77daf72
Fixed qdrant connection 2
khoroshevskyi Aug 18, 2025
63a9158
Added reference genome information table
khoroshevskyi Aug 19, 2025
22a2676
reindex changed to encode only
khoroshevskyi Aug 19, 2025
4e66dcf
updated version
khoroshevskyi Aug 19, 2025
19ad6c2
cleaning
khoroshevskyi Aug 21, 2025
5c716b8
Fixed pr comments
khoroshevskyi Aug 21, 2025
7ee080d
fixed comments of PR
khoroshevskyi Aug 27, 2025
4cfadd3
ref gen validation improvements + disabled pephub
khoroshevskyi Aug 28, 2025
e772271
fixed https://github.com/databio/bedhost/issues/216
khoroshevskyi Sep 11, 2025
8c5b9a1
Added gtars to requirements
khoroshevskyi Sep 11, 2025
3a8689b
Merge pull request #91 from databio/comp_search
khoroshevskyi Sep 11, 2025
033f68d
Versio 0.12.0 + changelog
khoroshevskyi Sep 11, 2025
02aae88
Update bbconf/modules/bedfiles.py
khoroshevskyi Sep 11, 2025
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2 changes: 1 addition & 1 deletion bbconf/_version.py
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Original file line number Diff line number Diff line change
@@ -1 +1 @@
__version__ = "0.11.4"
__version__ = "0.12.0"
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