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feat: Add GitHub integration with agent_prompts and github_components#1637

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May 28, 2025
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feat: Add GitHub integration with agent_prompts and github_components#1637
julian-risch merged 53 commits intomainfrom
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@julian-risch julian-risch commented Apr 10, 2025 •
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Related Issues

Proposed Changes:

  • Move github_components from experimental to a new integration
  • Move agent_prompts from experimental to a new integration
  • Add tools that wrap the new components

The idea is to enable users to run the example notebook (or a version with updated imports) after having installed this new integration.

How did you test it?

New unit tests and I ran all usage examples successfully with a test repo.

I have tested it with the updated notebook. I'll update the cookbook PR once the integration is released: deepset-ai/haystack-cookbook#183

Notes for the reviewer

  • I suggest we rename github_token parameter to api_key for consistency with many other integrations.
  • While we could find a way to set up integration tests, I would rather leave them out of this PR.
  • GithubRepositoryViewer has a branch parameter in the run method, which could also be named ref to make more clear it can also be a tag or commit hash. I prefer keeping the parameter name branch.
  • Some components have github_token: Optional[Secret] = None, because they can work without any token while others use Secret.from_env_var("GITHUB_TOKEN"). I suggest we use Secret.from_env_var("GITHUB_TOKEN", strict=False) where we currently have None as the default.
  • The internal implementation of the components differs in how they use _get_headers or _get_request_headers or define headers inline. We could refactor that.

Checklist

@github-actions github-actions bot added the type:documentation Improvements or additions to documentation label Apr 10, 2025
This was referenced Apr 10, 2025
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@julian-risch julian-risch marked this pull request as ready for review April 25, 2025 10:28
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julian-risch commented May 27, 2025 •
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@sjrl Finally ready for another review! We're using "data" instead of "init_parameters" in serialization now and all newly implemented tools expose outputs_to_string, inputs_from_state, and outputs_to_state as init parameters.
I tested this by running the updated notebook. The Agent forked the repo and committed to a branch.

What do you think about the parameter name github_token? In almost every other place, we use api_key, so for consistency with the many other integrations, we could rename github_token to api_key or leave it as is.

@julian-risch julian-risch requested a review from sjrl May 27, 2025 11:46
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sjrl reviewed May 28, 2025
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Comment thread integrations/github/src/haystack_integrations/tools/github/issue_commenter_tool.py Outdated
Comment on lines +18 to +19
:param name: Optional name for the tool.
:param description: Optional description.
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@sjrl sjrl May 28, 2025

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I do realize this is a bit confusing in our tools, but it seems that if we define a __init__ then these docstrings are put under the __init__ def. If there is no __init__ defined like in Tool then we put it in the class description.

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Ah, of course! Do you think we should a usage example here then (in addition to moving the param docstrings to the init)? I realized that's missing too.

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Yeah if it's not too much to ask, a usage example would be great!

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Comment thread integrations/github/src/haystack_integrations/tools/github/issue_commenter_tool.py Outdated
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Looks good! Only some minor comments left

sjrl
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Comment thread .github/workflows/github.yml
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@julian-risch julian-risch merged commit 3095079 into main May 28, 2025
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@julian-risch julian-risch deleted the move-github-components branch May 28, 2025 10:12
@julian-risch julian-risch mentioned this pull request May 28, 2025
Merged
Amnah199 pushed a commit that referenced this pull request Jun 4, 2025
@julian-risch @Amnah199
feat: Add GitHub integration with components, tools, and prompts (#1637)
34a494b 
* add agent_prompts and github_components

* rename to github_haystack

* remove github-haystack

* renamed integration, added components dir

* add tests, pydoc, update pyproject.toml

* add workflow

* fmt

* fmt

* lint

* ruff

* fmt

* lint:all

* replace StrEnum for py 3.9+ compatibility

* move files

* fix tests

* lint

* fix pydoc and extend init files

* Add integration:github to labeler.yml

* unify how we set GITHUB_TOKEN in tests

* fix 3 usage examples. 3 remaining

* remove empty lines from prompts

* GitHub capitalization

* add license header

* all caps for prompts

* add GitHubFileEditorTool

* enforce kwargs instead of positional args

* use _get_request_headers and base_headers consistently

* lint

* rename GitHubRepositoryViewer to GitHubRepoViewer

* lint

* add pipeline serialization test

* extend pipeline to_dict test

* set default branch of repo viewer

* lint

* add four more tools

* lint

* rename prompts

* add tests for four more tools

* rename context prompt

* add outputs_to_state as param to GitHubFileEditorTool

* add outputs_to_state as param to GitHubRepoViewerTool

* set default outputs_to_state for GitHubRepoViewerTool

* extract serialize_handlers to utils; don't use mutable defaults

* replace init_parameters with data for serde in FileEditor, RepoViewer

* add outputs_to_state to GitHubIssueCommenterTool; replace init_parameters with data

* add outputs_to_state to GitHubIssueViewerTool; replace init_parameters with data

* add outputs_to_state to GitHubPRCreatorTool; replace init_parameters with data

* move param docstrings to init methods

* use generate_qualified_class_name instead of hardcoded name

* test with lowest supported version

* don't test http_client_kwargs for compatibility with Haystack 2.12
Amnah199 added a commit that referenced this pull request Jun 4, 2025
@Amnah199 @denisw
feat: Allow full metadata field customization (#1893)
06345b2 
* feat(azure-ai-search): Allow full metadata field customization

So far, the `metadata_fields` init parameter only allowed a few custom
simple value types to be mapped (e.g., no nested metadata) and also
hardcoded the fields to be only `filterable` (but not `searchable`
or `facetable`, for instance).

For full flexibility, allow an Azure AI Search `SearchField` instance
to be passed as mapping instead of a Python type.

* PR comments

* feat: Add OpenRouter integration (#1723)

* Add openrouter integration

* Add tests for chat generator and support extra headers

* Add async tests

* Fix config files

* Add example

* Fixes

* Fix read me

* PR comments

* Small fixes

* Updated labeler and README

* Update docstrings

* Add user agent to Azure AI Search(#1743)

* docs: update changelog for integrations/azure_ai_search (#1745)

* Update changelog for integrations/azure_ai_search

* Update CHANGELOG.md

---------


Co-authored-by: Amna Mubashar <amnahkhan.ak@gmail.com>

* docs: ChatMessage examples (#1752)

* feat: Support Llama API as a Chat Generator (#1742)

* init: llama-api chat generator

* docs: update comments for LlamaChatGenerator

* feat: add keyword only *

* fix: replace streaming_callback type

* fix: add Toolset for tools

* fix: rm unused typing

* docs: add meta header

* docs: fix comments to llama api

* docs: add meta header

* docs: add meta header

* fix: rename LlamaChat to MetaLlamaChat

* docs: add meta header

* docs: align doc format

* add workflow for nightly tests

* add meta_llama to labeler

* add new integration to repo readme overview table

* replace .llama.chat. with .meta_llama.chat.

* fmt

* replace llama with meta_llama in pydocs

---------

Co-authored-by: Julian Risch <julian.risch@deepset.ai>

* Update changelog for integrations/meta_llama (#1754)

Co-authored-by: julian-risch <4181769+julian-risch@users.noreply.github.com>

* chore(deps): bump fossas/fossa-action from 1.6.0 to 1.7.0 (#1750)

Bumps [fossas/fossa-action](https://github.com/fossas/fossa-action) from 1.6.0 to 1.7.0.
- [Release notes](https://github.com/fossas/fossa-action/releases)
- [Commits](fossas/fossa-action@v1.6.0...v1.7.0)

---
updated-dependencies:
- dependency-name: fossas/fossa-action
  dependency-version: 1.7.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Update how skipping works (#1756)

* test: Ollama - make test_run_with_response_format more robust (#1757)

* feat: adapt `OllamaGenerator` metadata to OpenAI format (#1753)

* feat: adapt Ollama metadata to OpenAI format in `OllamaGenerator`

* Add: `OllamaGenerator` support in Langfuse

* Ran Linters

* Revert "Add: `OllamaGenerator` support in Langfuse"

This reverts commit 1f399e0.

---------

Co-authored-by: Sebastian Husch Lee <sjrl@users.noreply.github.com>

* Add: `OllamaGenerator` support in Langfuse (#1759)

* Update changelog for integrations/ollama (#1761)

Co-authored-by: sjrl <10526848+sjrl@users.noreply.github.com>

* Update changelog for integrations/langfuse (#1762)

Co-authored-by: sjrl <10526848+sjrl@users.noreply.github.com>

* docs: update changelog for integrations/openrouter (#1763)

* Update changelog for integrations/openrouter


---------

Co-authored-by: Amnah199 <13835656+Amnah199@users.noreply.github.com>
Co-authored-by: Amna Mubashar <amnahkhan.ak@gmail.com>

* chore: fix README for meta-llama (#1766)

* chore(deps): bump aws-actions/configure-aws-credentials (#1751)

Bumps [aws-actions/configure-aws-credentials](https://github.com/aws-actions/configure-aws-credentials) from 4.2.0 to 4.2.1.
- [Release notes](https://github.com/aws-actions/configure-aws-credentials/releases)
- [Changelog](https://github.com/aws-actions/configure-aws-credentials/blob/main/CHANGELOG.md)
- [Commits](aws-actions/configure-aws-credentials@f24d719...b475783)

---
updated-dependencies:
- dependency-name: aws-actions/configure-aws-credentials
  dependency-version: 4.2.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* ci: Bedrock - improve worfklow; skip tests from CI (#1773)

* feat: OllamaChatGenerator - add Toolset support (#1765)

* Add Toolset support to OllamaChatGenerator

* Lint

* Lambdas are not serializable

* Lint

* Generate tool call id if not available

* Lint

* Revert back to not using ToolCall id

* Lint

* Update changelog for integrations/ollama (#1775)

Co-authored-by: vblagoje <458335+vblagoje@users.noreply.github.com>

* feat: MCPTool and MCPToolset async resource management improvements (#1758)

* Add MCPClientSessionManager to connect/close mcp clients

* Update and refactor mcp tests

* More descriptive connection error raising

* Proper test cleanup

* Testing CI windows

* linting

* Improve connection error raise

* PR feedback

* Proper naming, and more precise cleanup sequence

---------

Co-authored-by: Michele Pangrazzi <xmikex83@gmail.com>

* test: add service_tier to test_convert_anthropic_chunk_to_streaming_chunk (#1778)

* fix: Bring Mistral integration up to date with changes made to OpenAIChatGenerator and OpenAI Embedders (#1774)

* Bringing Mistral up to date

* Fix Mistral Embedders to be deserializable

* Fix lint

* Fix lint

* Bump minimum haystack version

* Update changelog for integrations/mistral (#1781)

Co-authored-by: sjrl <10526848+sjrl@users.noreply.github.com>

* feat: Add `to_dict` to `STACKITDocumentEmbedder` and `STACKITTextEmbedder` and more init parameters from underlying OpenAI classes (#1779)

* Add to_dicts and more tests

* Bumpy haystack version

* Add changes to chat generator as well

* Update changelog for integrations/stackit (#1782)

Co-authored-by: sjrl <10526848+sjrl@users.noreply.github.com>

* feat: add run_async for CohereChatGenerator (#1689)

* CohereChatGenerator async support

* Tests and linter fixes

* fix

* refinements

* refactor + tests reorgani    |             ^^^^^ T201

* rename test

* remove markers

* reformat

* fix

* minor fixes

* Trigger CI

---------

Co-authored-by: anakin87 <stefanofiorucci@gmail.com>

* Update changelog for integrations/cohere (#1784)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* docs: update changelog for integrations/google_ai (#1812)

* Update changelog for integrations/google_ai

* Update CHANGELOG.md

---------

Co-authored-by: wochinge <7667273+wochinge@users.noreply.github.com>
Co-authored-by: Stefano Fiorucci <stefanofiorucci@gmail.com>

* fix: Fix exposing Qdrant api-key in `metadata` field when running `to_dict` (#1813)

* Add to_dict test

* Add more type hints

* More type hints

* Add fix for exposing api key in metadata when running to_dict

* Add unit test

* PR comments

* Update changelog for integrations/qdrant (#1814)

Co-authored-by: sjrl <10526848+sjrl@users.noreply.github.com>

* ci: check lowest direct dependencies (#1788)

* ci: check lowest direct dependencies

* try single quotes

* debug

* debugging

* try chroma

* no bedrock

* retry

* explicit option

* don't run tests

* debug 1

* try output file

* more

* no deepeval

---------

Co-authored-by: David S. Batista <dsbatista@gmail.com>

* build: add pins for Anthropic (#1811)

* build: add pins for Anthropic

* rm file incorrectly added

* Update changelog for integrations/anthropic (#1815)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* build: add pins for Vertex (#1810)

* Update changelog for integrations/google_vertex (#1816)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* build: add pins for Cohere (#1817)

* Update changelog for integrations/cohere (#1829)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* build: remove pin for Deepeval (#1826)

* Update changelog for integrations/deepeval (#1830)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* feat: Add streamable-http transport MCP support (#1777)

* Add streamable-http transport

* Improve error message for tool invocation

* Add streamable MCPTool example, update examples

* Improve examples

* Add unit tests

* Update integrations/mcp/examples/mcp_client.py

Co-authored-by: Amna Mubashar <amnahkhan.ak@gmail.com>

* initialize vars outside try block

* Small fix

* Fix linting

---------

Co-authored-by: Amna Mubashar <amnahkhan.ak@gmail.com>

* Update changelog for integrations/mcp (#1831)

Co-authored-by: vblagoje <458335+vblagoje@users.noreply.github.com>

* build: pining lower versions of haystack and `aiohttp` for `ElasticSearch` (#1827)

* pining lower versions

* adding missing comma

* pinning to >=2.4.0

* pinning to >=2.3.0

* pinning aiohttp to >=3.0.0

* pinning aiohttp to >=2.0.0

* pinning aiohttp to >=2.5.0

* pinning aiohttp to >=2.6.0

* pinning aiohttp to >=3.0.0

* pinning aiohttp to >=3.1.0

* pinning aiohttp to >=3.2.0

* pinning aiohttp to >=3.3.0

* pinning aiohttp to >=3.10.0

* pinning aiohttp to >=3.9.0

* pinning aiohttp to >=3.8.0

* reverting back aiohttp to 3.9.0

* Update changelog for integrations/elasticsearch (#1834)

Co-authored-by: davidsbatista <7937824+davidsbatista@users.noreply.github.com>

* build: add Jina pins (#1836)

* Update changelog for integrations/jina (#1838)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* build: add Langfuse pins (#1837)

* Update changelog for integrations/langfuse (#1839)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* build: pin version for `pymongo` and `haystack` in MongoDB integration (#1832)

* pinning to older version o haystack and mongodb

* pinining haystack and pymongo

* wip

* fixing format

* adding missing CI job

* making sure lowest version of pymongo has the async client

* making sure lowest version of pymongo has the async client

* versioning

* haysack 2.9

* haysack 2.10

* haysack 2.11

* Remove failing test. No need to have it here since it's already tested in haystack main. (#1842)

* ci: Missing labels for stackit and anthropic (#1844)

* Missing labels for stackit and anthropic

* PR comments

* build: app pins for MCP (#1845)

* Update changelog for integrations/mongodb_atlas (#1840)

Co-authored-by: davidsbatista <7937824+davidsbatista@users.noreply.github.com>
Co-authored-by: David S. Batista <dsbatista@gmail.com>

* docs: update changelog for integrations/mcp (#1848)

* Update changelog for integrations/mcp

* Update CHANGELOG.md

---------

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>
Co-authored-by: Stefano Fiorucci <stefanofiorucci@gmail.com>

* build: add pins for Pgvector (#1849)

* Update changelog for integrations/pgvector (#1850)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* build: add pins for Optimum (#1847)

* build: add pins for Optimum

* try with python 3.13

* don't call HF on unit tests

* Update changelog for integrations/optimum (#1852)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* build: add pins for Qdrant (#1853)

* build: add pins for Pinecone (#1851)

Co-authored-by: David S. Batista <dsbatista@gmail.com>

* Update changelog for integrations/pinecone (#1855)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* docs: update changelog for integrations/qdrant (#1856)

* Update changelog for integrations/qdrant

* Update CHANGELOG.md

---------

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>
Co-authored-by: Stefano Fiorucci <stefanofiorucci@gmail.com>

* chore: review license compliance workflow (#1843)

* chore: review license compliance workflow

* refactor

* deepeval

* build: add pins for Ragas (#1854)

* feat: Add GitHub integration with components, tools, and prompts (#1637)

* add agent_prompts and github_components

* rename to github_haystack

* remove github-haystack

* renamed integration, added components dir

* add tests, pydoc, update pyproject.toml

* add workflow

* fmt

* fmt

* lint

* ruff

* fmt

* lint:all

* replace StrEnum for py 3.9+ compatibility

* move files

* fix tests

* lint

* fix pydoc and extend init files

* Add integration:github to labeler.yml

* unify how we set GITHUB_TOKEN in tests

* fix 3 usage examples. 3 remaining

* remove empty lines from prompts

* GitHub capitalization

* add license header

* all caps for prompts

* add GitHubFileEditorTool

* enforce kwargs instead of positional args

* use _get_request_headers and base_headers consistently

* lint

* rename GitHubRepositoryViewer to GitHubRepoViewer

* lint

* add pipeline serialization test

* extend pipeline to_dict test

* set default branch of repo viewer

* lint

* add four more tools

* lint

* rename prompts

* add tests for four more tools

* rename context prompt

* add outputs_to_state as param to GitHubFileEditorTool

* add outputs_to_state as param to GitHubRepoViewerTool

* set default outputs_to_state for GitHubRepoViewerTool

* extract serialize_handlers to utils; don't use mutable defaults

* replace init_parameters with data for serde in FileEditor, RepoViewer

* add outputs_to_state to GitHubIssueCommenterTool; replace init_parameters with data

* add outputs_to_state to GitHubIssueViewerTool; replace init_parameters with data

* add outputs_to_state to GitHubPRCreatorTool; replace init_parameters with data

* move param docstrings to init methods

* use generate_qualified_class_name instead of hardcoded name

* test with lowest supported version

* don't test http_client_kwargs for compatibility with Haystack 2.12

* build: pinning `unstructured` to lowest working versions (#1841)

* finding lowest working versions

* adding missing CI job

* adding missing limitation

* feat: AnthropicChatGenerator - add Toolset support (#1787)

* AnthropicChatGenerator - add Toolset support

* Use new serialization method for tools

* Update haystack dep to 2.13.1 which includes Toolset

* Small update

* buid: add pins for Snowflake + small refactoring (#1860)

* Update changelog for integrations/snowflake (#1862)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* Update changelog for integrations/ragas (#1857)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* Update changelog for integrations/unstructured (#1861)

Co-authored-by: davidsbatista <7937824+davidsbatista@users.noreply.github.com>

* build: add pins for Nvidia (#1846)

* Update changelog for integrations/nvidia (#1863)

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>

* build: add pins for Google AI (#1828)

* docs: update changelog for integrations/google_ai (#1864)

* Update changelog for integrations/google_ai

* Update CHANGELOG.md

---------

Co-authored-by: anakin87 <44616784+anakin87@users.noreply.github.com>
Co-authored-by: Stefano Fiorucci <stefanofiorucci@gmail.com>

* Update changelog for integrations/anthropic (#1865)

Co-authored-by: vblagoje <458335+vblagoje@users.noreply.github.com>

* docs: Update changelog for integrations/github (#1858)

Co-authored-by: julian-risch <4181769+julian-risch@users.noreply.github.com>

* feat: adding an `HybridRetriever` as a `Supercomponent` having `OpenSearch` as the document store (#1701)

* adding tests

* linting and typing

* adding env variable

* env variable

* extending docstring

* removing generation part

* updating tests

* adding a run test with mocked sentence_transformers

* fixing format

* refactor: use `component_to_dict` in OpenSearchHybridRetriever (#1866)

* Update changelog for integrations/opensearch (#1867)

Co-authored-by: davidsbatista <7937824+davidsbatista@users.noreply.github.com>

* oshr-docs (#1868)

* refactor: OpenSearchHybridRetriever use `deserialize_chatgenerator_inplace` (#1870)

* test to use deserialize_chatgenerator_inplace

* removing unused imports

* using deserialize_chatgenerator_inplace

* Update integrations/opensearch/src/haystack_integrations/components/retrievers/opensearch/open_search_hybrid_retriever.py

* Update changelog for integrations/opensearch (#1874)

Co-authored-by: davidsbatista <7937824+davidsbatista@users.noreply.github.com>

* feat: add run_async support for CohereTextEmbedder (#1873)

* feat: add run_async support for CohereTextEmbedder

* fix: review comments

* feat: Add Google GenAI GoogleGenAIChatGenerator (#1875)

* Initial work

* Remove utils

* Add async support

* Async test issue

* Simplify async tests

* Linting

* Improve comment

* Linting

* Improve pyproject.toml

* Add new google genai integration to workflow

* Add labeler

* Add pydoc

* Pin deps

* Pin google-genai dep

* Update integrations/google_genai/src/haystack_integrations/components/generators/google_genai/chat/chat_generator.py

Co-authored-by: Sebastian Husch Lee <10526848+sjrl@users.noreply.github.com>

* Update integrations/google_genai/src/haystack_integrations/components/generators/google_genai/chat/chat_generator.py

Co-authored-by: Sebastian Husch Lee <10526848+sjrl@users.noreply.github.com>

* PR feedback

* Add system message comment

* Leave only minimal working examples in README

* Update integrations/google_genai/src/haystack_integrations/components/generators/google_genai/chat/chat_generator.py

Co-authored-by: Julian Risch <julian.risch@deepset.ai>

* Update integrations/google_genai/src/haystack_integrations/components/generators/google_genai/chat/chat_generator.py

Co-authored-by: Julian Risch <julian.risch@deepset.ai>

* Linting

---------

Co-authored-by: Sebastian Husch Lee <10526848+sjrl@users.noreply.github.com>
Co-authored-by: Julian Risch <julian.risch@deepset.ai>

* Update changelog for integrations/google_genai (#1886)

Co-authored-by: vblagoje <458335+vblagoje@users.noreply.github.com>

* feat: Use Langfuse local to_openai_dict_format function to serialize messages (#1885)

* Use Langfuse local to_openai_dict_format function to serialize messages

* Linting

* PR feedback

* Add detailed tracing for GoogleGenAIChatGenerator (#1887)

* docs: update changelog for integrations/langfuse (#1888)

* Update changelog for integrations/langfuse

* Update CHANGELOG.md

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Co-authored-by: vblagoje <458335+vblagoje@users.noreply.github.com>
Co-authored-by: Vladimir Blagojevic <dovlex@gmail.com>

* try reenabling pinecone tests (#1871)

* PR comments

* Small updates

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Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: Denis Washington <denis.washington@futurice.com>
Co-authored-by: Denis Washington <denis@denisw.de>
@sjrl sjrl added the new integration Discuss the creation of a new integration in Core label Sep 16, 2025
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integration:github new integration Discuss the creation of a new integration in Core topic:CI type:documentation Improvements or additions to documentation

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