chore: fix pre-commit

Author: ycexiao

src/diffpy/srfit/structure/cctbxparset.py

@@ -136,7 +136,18 @@ class CCTBXUnitCellParSet(ParameterSet):
     ----------
     name
         Always "unitcell".
-        a, b, c, alpha, beta, gamma --  Unit cell parameters (ParameterAdapter).
+    a
+        Unit cell parameters (ParameterAdapter).
+    b
+        Unit cell parameters (ParameterAdapter).
+    c
+        Unit cell parameters (ParameterAdapter).
+    alpha
+        Unit cell parameters (ParameterAdapter).
+    beta
+        Unit cell parameters (ParameterAdapter).
+    gamma
+        Unit cell parameters (ParameterAdapter).
     """
 
     def __init__(self, strups):

src/diffpy/srfit/structure/diffpyparset.py

@@ -174,20 +174,32 @@ def _latsetter(par):
 class DiffpyLatticeParSet(ParameterSet):
     """A wrapper for diffpy.structure.Lattice.
 
-        This class derives from diffpy.srfit.fitbase.parameterset.ParameterSet. See
-        this class for base attributes.
+    This class derives from diffpy.srfit.fitbase.parameterset.ParameterSet.
+    See this class for base attributes.
 
-        Attributes
-        ----------
-        lattice
-            The diffpy.structure.Lattice this is adapting
-        name
-            Always "lattice"
-        angunits
-            "deg", the units of angle
+    Attributes
+    ----------
+    lattice
+        The diffpy.structure.Lattice this is adapting
+    name
+        Always "lattice"
+    angunits
+        "deg", the units of angle
 
-    Managed Parameters
-    ------------------
+    Parameters
+    ----------
+    a
+        Unit cell parameters (ParameterAdapter).
+    b
+        Unit cell parameters (ParameterAdapter).
+    c
+        Unit cell parameters (ParameterAdapter).
+    alpha
+        Unit cell parameters (ParameterAdapter).
+    beta
+        Unit cell parameters (ParameterAdapter).
+    gamma
+        Unit cell parameters (ParameterAdapter).
     """
 
     def __init__(self, lattice):

src/diffpy/srfit/structure/objcrystparset.py

@@ -1658,36 +1658,36 @@ def getValue(self):
 class ObjCrystCrystalParSet(SrRealParSet):
     """A adaptor for pyobjcryst.crystal.Crystal instance.
 
-        This class derives from diffpy.srfit.fitbase.parameterset.ParameterSet. See
-        this class for base attributes.
+    This class derives from diffpy.srfit.fitbase.parameterset.ParameterSet.
+    See this class for base attributes.
 
-        Attributes
-        ----------
-        stru
-            The adapted pyobjcryst.Crystal.
-        scatterers
-            The list of aggregated ScattererParSets (either
-            ObjCrystAtomParSet or ObjCrystMoleculeParSet), provided for
-            convenience.
-        _sgpars
-            A BaseSpaceGroupParameters object containing free structure
-            Parameters. See the diffpy.srfit.structure.sgconstraints
-            module.
-        sgpars
-            property that creates _sgpars when it is needed.
-        angunits
-            "rad", the units of angle
-
-    Managed Parameters
-    ------------------
-
-        Managed ParameterSets
-        ---------------------
-        <sname>
-            A ObjCrystScattererParSet (either ObjCrystAtomParSet or
-            ObjCrystMoleculeParSet), where <sname> is the name of the
-            adapted pyobjcryst.atom.Atom or
-            pyobjcryst.molecule.Molecule.
+    Attributes
+    ----------
+    stru
+        The adapted pyobjcryst.Crystal.
+    scatterers
+        The list of aggregated ScattererParSets (either
+        ObjCrystAtomParSet or ObjCrystMoleculeParSet), provided for
+        convenience.
+    _sgpars
+        A BaseSpaceGroupParameters object containing free structure
+        Parameters. See the diffpy.srfit.structure.sgconstraints
+        module.
+    sgpars
+        property that creates _sgpars when it is needed.
+    angunits
+        "rad", the units of angle
+
+    Parameters
+    ----------
+    x
+        Scatterer position in crystal coordinates (ParameterWraper)
+    y
+        Scatterer position in crystal coordinates (ParameterWraper)
+    z
+        Scatterer position in crystal coordinates (ParameterWraper)
+    occ
+        Occupancy of the scatterer on its crystal site (ParameterWraper)
     """
 
     def __init__(self, name, cryst):