diff --git a/.vortex/installer/src/Prompts/Handlers/Tools.php b/.vortex/installer/src/Prompts/Handlers/Tools.php
index 739f36469..5bafdfcc0 100644
--- a/.vortex/installer/src/Prompts/Handlers/Tools.php
+++ b/.vortex/installer/src/Prompts/Handlers/Tools.php
@@ -302,8 +302,7 @@ public static function getToolDefinitions(string $filter = 'all'): array {
 
       self::PHPMD => [
         'title' => 'PHP Mess Detector',
-        'present' => fn(): mixed => File::contains($this->dstDir . '/composer.json', 'phpmd/phpmd') ||
-        File::exists($this->dstDir . '/phpmd.xml'),
+        'present' => fn(): mixed => File::contains($this->dstDir . '/composer.json', 'phpmd/phpmd'),
         'composer.json' => function (JsonManipulator $cj): void {
           $cj->removeSubNode('require-dev', 'phpmd/phpmd');
         },
diff --git a/.vortex/installer/src/Prompts/Handlers/Webroot.php b/.vortex/installer/src/Prompts/Handlers/Webroot.php
index 1451b30a7..aa6c119f0 100644
--- a/.vortex/installer/src/Prompts/Handlers/Webroot.php
+++ b/.vortex/installer/src/Prompts/Handlers/Webroot.php
@@ -144,12 +144,13 @@ public function process(): void {
       sprintf('%s/', $webroot) => $v . '/',
       sprintf('%s\/', $webroot) => $v . '\/',
       sprintf(': %s', $webroot) => ': ' . $v,
-      sprintf('=%s', $webroot) => '=' . $v,
       sprintf('!%s', $webroot) => '!' . $v,
       sprintf('/\/%s\//', $webroot) => '/' . $v . '/',
       sprintf('/\'\/%s\'/', $webroot) => "'/" . $v . "'",
     ]);
 
+    File::replaceContentAsync(fn(string $content): string => preg_replace('/=' . preg_quote($webroot, '/') . '\b/', '=' . $v, $content) ?? $content);
+
     rename($t . DIRECTORY_SEPARATOR . $webroot, $t . DIRECTORY_SEPARATOR . $v);
   }
 
diff --git a/.vortex/installer/tests/Fixtures/handler_process/hosting_acquia/.env b/.vortex/installer/tests/Fixtures/handler_process/hosting_acquia/.env
index e4cfe0813..2b371977c 100644
--- a/.vortex/installer/tests/Fixtures/handler_process/hosting_acquia/.env
+++ b/.vortex/installer/tests/Fixtures/handler_process/hosting_acquia/.env
@@ -55,15 +55,6 @@
  
  ################################################################################
  #                                NOTIFICATIONS                                 #
-@@ -202,7 +207,7 @@
- # An email address to send notifications from.
- #
- # Applies to email notifications.
--VORTEX_NOTIFY_EMAIL_FROM=webmaster@star-wars.com
-+VORTEX_NOTIFY_EMAIL_FROM=docrootmaster@star-wars.com
- 
- # Email address(es) to send notifications to.
- #
 @@ -212,17 +217,3 @@
  # with optional names in the format "email|name".
  # Example: "to1@example.com|Jane Doe, to2@example.com|John Doe"
diff --git a/.vortex/installer/tests/Fixtures/handler_process/hosting_project_name___acquia/.env b/.vortex/installer/tests/Fixtures/handler_process/hosting_project_name___acquia/.env
index dbdbb975e..d43b77eda 100644
--- a/.vortex/installer/tests/Fixtures/handler_process/hosting_project_name___acquia/.env
+++ b/.vortex/installer/tests/Fixtures/handler_process/hosting_project_name___acquia/.env
@@ -55,15 +55,6 @@
  
  ################################################################################
  #                                NOTIFICATIONS                                 #
-@@ -202,7 +207,7 @@
- # An email address to send notifications from.
- #
- # Applies to email notifications.
--VORTEX_NOTIFY_EMAIL_FROM=webmaster@star-wars.com
-+VORTEX_NOTIFY_EMAIL_FROM=docrootmaster@star-wars.com
- 
- # Email address(es) to send notifications to.
- #
 @@ -212,17 +217,3 @@
  # with optional names in the format "email|name".
  # Example: "to1@example.com|Jane Doe, to2@example.com|John Doe"
diff --git a/.vortex/installer/tests/Unit/Handlers/ToolsHandlerDiscoveryTest.php b/.vortex/installer/tests/Unit/Handlers/ToolsHandlerDiscoveryTest.php
index 08d51f11b..61fd64b53 100644
--- a/.vortex/installer/tests/Unit/Handlers/ToolsHandlerDiscoveryTest.php
+++ b/.vortex/installer/tests/Unit/Handlers/ToolsHandlerDiscoveryTest.php
@@ -140,14 +140,6 @@ function (AbstractHandlerDiscoveryTestCase $test, Config $config): void {
         $test->stubComposerJsonDependencies(['phpmd/phpmd' => '*'], TRUE);
       },
     ];
-    yield 'tools - discovery - phpmd, alt' => [
-      [],
-      [Tools::id() => [Tools::PHPMD]] + $expected_installed,
-      function (AbstractHandlerDiscoveryTestCase $test, Config $config): void {
-        $test->stubVortexProject($config);
-        File::dump(static::$sut . '/phpmd.xml');
-      },
-    ];
     yield 'tools - discovery - phpunit' => [
       [],
       [Tools::id() => [Tools::PHPUNIT]] + $expected_installed,