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Add comprehensive skill extraction JSON for repository analysis

Co-authored-by: duck-lint <250741170+duck-lint@users.noreply.github.com> Agent-Logs-Url: https://github.com/duck-lint/Python_init_and_bootstrap_template/sessions/6b88f156-3c3e-4f9f-808f-d1b011bbed7a

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skill_extraction.json

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