Fix parameter scale in sample_from_prior

dweindl · dweindl · commit a93639931f9a · 2025-05-07T12:03:19.000+02:00
Return sampled parameters on the parameter scale. This broke in PEtab-dev#329 & PEtab-dev#335.
diff --git a/petab/v1/sampling.py b/petab/v1/sampling.py
@@ -33,7 +33,7 @@ def sample_from_prior(
         bounds=tuple(bounds),
         transformation=scaling,
     )
-    return prior.sample(shape=(n_starts,))
+    return prior.sample(shape=(n_starts,), x_scaled=True)
 
 
 def sample_parameter_startpoints(

Original file line number	Diff line number	Diff line change
`@@ -33,7 +33,7 @@ def sample_from_prior(`
`33`	`33`	`bounds=tuple(bounds),`
`34`	`34`	`transformation=scaling,`
`35`	`35`	`)`
`36`		`- return prior.sample(shape=(n_starts,))`
	`36`	`+ return prior.sample(shape=(n_starts,), x_scaled=True)`
`37`	`37`
`38`	`38`
`39`	`39`	`def sample_parameter_startpoints(`