Hi,
I'm failing in running the example here.
library(dynwrap)
library(dyneval)
library(dynmethods)
library(tidyverse)
dataset <- dyntoy::generate_dataset(model = "bifurcating")
models <- infer_trajectories(dataset, list(ti_comp1(), ti_mst(), ti_shuffle()))
dataset <- add_cell_waypoints(dataset)
models$model <- map(models$model, add_cell_waypoints)
Here is the error I received:
Error: is_wrapper_with_trajectory(trajectory) isn't true.
The code breaks at the last line.
My session info:
> sessionInfo()
R version 3.6.3 (2020-02-29)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.4 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=fi_FI.UTF-8
[4] LC_COLLATE=en_US.UTF-8 LC_MONETARY=fi_FI.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=fi_FI.UTF-8 LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=fi_FI.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] forcats_0.4.0 stringr_1.4.0 dplyr_0.8.4 purrr_0.3.3 readr_1.3.1 tidyr_1.0.2
[7] tibble_2.1.3 ggplot2_3.2.1 tidyverse_1.3.0 dynmethods_1.0.5 dyneval_0.9.9 dynwrap_1.1.4
loaded via a namespace (and not attached):
[1] nlme_3.1-144 fs_1.3.1 dynutils_1.0.4.9000 bit64_0.9-7
[5] lubridate_1.7.4 RColorBrewer_1.1-2 httr_1.4.1 tools_3.6.3
[9] backports_1.1.5 R6_2.4.1 rpart_4.1-15 Hmisc_4.3-1
[13] DBI_1.1.0 lazyeval_0.2.2 colorspace_1.4-1 nnet_7.3-13
[17] withr_2.1.2 tidyselect_1.0.0 carrier_0.1.0 gridExtra_2.3
[21] processx_3.4.2 proxyC_0.1.5 bit_1.1-15.2 compiler_3.6.3
[25] cli_2.0.1 rvest_0.3.5 htmlTable_1.13.3 hdf5r_1.3.1
[29] xml2_1.2.2 scales_1.1.0 checkmate_2.0.0 mvtnorm_1.0-12
[33] digest_0.6.23 foreign_0.8-75 base64enc_0.1-3 jpeg_0.1-8.1
[37] pkgconfig_2.0.3 htmltools_0.4.0 dbplyr_1.4.2 htmlwidgets_1.5.1
[41] rlang_0.4.4 readxl_1.3.1 rstudioapi_0.11 generics_0.0.2
[45] jsonlite_1.6.1 acepack_1.4.1 magrittr_1.5 Formula_1.2-3
[49] Matrix_1.2-18 fansi_0.4.1 Rcpp_1.0.3 munsell_0.5.0
[53] lifecycle_0.1.0 stringi_1.4.5 yaml_2.2.1 plyr_1.8.5
[57] grid_3.6.3 crayon_1.3.4 lattice_0.20-40 haven_2.2.0
[61] splines_3.6.3 hms_0.5.3 dynfeature_1.0.0.9000 knitr_1.28
[65] ps_1.3.0 pillar_1.4.3 igraph_1.2.4.2 ranger_0.12.1
[69] babelwhale_1.0.1 reshape2_1.4.3 reprex_0.3.0 glue_1.3.1
[73] latticeExtra_0.6-29 data.table_1.12.8 remotes_2.1.0 RcppParallel_4.4.4
[77] modelr_0.1.5 png_0.1-7 vctrs_0.2.2 dynparam_1.0.0
[81] testthat_2.3.1 cellranger_1.1.0 gtable_0.3.0 assertthat_0.2.1
[85] xfun_0.12 broom_0.5.4 survival_3.1-8 dyntoy_0.9.9
[89] cluster_2.1.0 ellipsis_0.3.0
>
Thanks for any help in advance.
Best
SirKuikka
Hi,
I'm failing in running the example here.
Here is the error I received:
Error: is_wrapper_with_trajectory(trajectory) isn't true.The code breaks at the last line.
My session info:
Thanks for any help in advance.
Best
SirKuikka