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EttoreMEttoreM
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Modification of @graph is now centralised
1 parent b7df62f commit a15258e

13 files changed

Lines changed: 48 additions & 323 deletions

‎rocrate_validator/profiles/five-safes-crate/may/11_workflow_execution_phase.ttl‎

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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root schema:mainEntity ?instrument ;
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a schema:Dataset .
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?metadatafile schema:about ?root .
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FILTER(contains(str(?metadatafile), "ro-crate-metadata.json"))
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}
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"""
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] ;
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .
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five-safes-crate:WorkflowexecutionObjectHasStartTimeIfBegun
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a sh:NodeShape ;
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sh:name "WorkflowExecution" ;

‎rocrate_validator/profiles/five-safes-crate/may/1_responsible_project.ttl‎

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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root schema:mainEntity ?instrument ;
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a schema:Dataset .
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?metadatafile schema:about ?root .
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FILTER(contains(str(?metadatafile), "ro-crate-metadata.json"))
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}
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"""
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] ;
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .
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five-safes-crate:ResponsibleProject
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a sh:NodeShape ;
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sh:name "Responsible Project" ;

‎rocrate_validator/profiles/five-safes-crate/must/0_workflow_run_inference.ttl‎

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# Copyright (c) 2025 eScience Lab, The University of Manchester
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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@prefix ro-crate: <https://github.com/crs4/rocrate-validator/profiles/ro-crate/> .
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@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
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@prefix schema: <http://schema.org/> .
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@prefix sh: <http://www.w3.org/ns/shacl#> .
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@prefix validator: <https://github.com/crs4/rocrate-validator/> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:order 1 ;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root a ro-crate:RootDataEntity ;
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schema:mainEntity ?instrument .
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}
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"""
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] ;
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .

‎rocrate_validator/profiles/five-safes-crate/must/11_workflow_execution_phase.ttl‎

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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root schema:mainEntity ?instrument ;
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a schema:Dataset .
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?metadatafile schema:about ?root .
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FILTER(contains(str(?metadatafile), "ro-crate-metadata.json"))
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}
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"""
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] ;
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .
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five-safes-crate:WorkflowMustHaveDescriptiveName
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a sh:NodeShape ;
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sh:name "WorkflowExecution" ;

‎rocrate_validator/profiles/five-safes-crate/must/7_requested_workflow_run.ttl‎

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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root schema:mainEntity ?instrument ;
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a schema:Dataset .
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?metadatafile schema:about ?root .
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FILTER(contains(str(?metadatafile), "ro-crate-metadata.json"))
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}
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"""
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] ;
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# Expand data graph with triples from the file data entity
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .
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five-safes-crate:RootDataEntityMentionsWorkflowRun
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a sh:NodeShape ;
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sh:name "RootDataEntity" ;

‎rocrate_validator/profiles/five-safes-crate/should/10_outputs.ttl‎

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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root schema:mainEntity ?instrument ;
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a schema:Dataset .
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?metadatafile schema:about ?root .
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FILTER(contains(str(?metadatafile), "ro-crate-metadata.json"))
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}
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"""
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] ;
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .
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five-safes-crate:WorkflowRunHasResultIfActionCompleted
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a sh:NodeShape ;
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sh:name "WorkflowRun" ;

‎rocrate_validator/profiles/five-safes-crate/should/11_workflow_execution_phase.ttl‎

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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root schema:mainEntity ?instrument ;
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a schema:Dataset .
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?metadatafile schema:about ?root .
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FILTER(contains(str(?metadatafile), "ro-crate-metadata.json"))
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}
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"""
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] ;
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .
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five-safes-crate:RootDataEntityShouldMentionWorkflow
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a sh:NodeShape ;
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sh:name "RootDataEntity" ;

‎rocrate_validator/profiles/five-safes-crate/should/1_requesting_agent.ttl‎

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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root schema:mainEntity ?instrument ;
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a schema:Dataset .
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?metadatafile schema:about ?root .
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FILTER(contains(str(?metadatafile), "ro-crate-metadata.json"))
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}
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"""
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] ;
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .
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five-safes-crate:AgentIsMemberOf
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a sh:NodeShape ;
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sh:name "Requesting Agent" ;

‎rocrate_validator/profiles/five-safes-crate/should/1_responsible_project.ttl‎

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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root schema:mainEntity ?instrument ;
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a schema:Dataset .
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?metadatafile schema:about ?root .
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FILTER(contains(str(?metadatafile), "ro-crate-metadata.json"))
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}
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"""
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] ;
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .
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five-safes-crate:ResponsibleProjectMemberAndSourceOrganizationIntersection
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a sh:NodeShape ;
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sh:name "Organizations (members of Responsible Project)" ;

‎rocrate_validator/profiles/five-safes-crate/should/2_requesting_agent.ttl‎

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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
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ro-crate:FindWorkflowRunAction a sh:NodeShape, validator:HiddenShape;
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sh:name "Identify the CreateAction Entity that corresponds to the Workflow run" ;
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sh:description """The Workflow Run is the CreateAction entity that refers to Workflow run.
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This is identified by checking that the CreateAction entity has an `instrument` property
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that references the same entity as the `mainEntity` property of the Root Data Entity.""" ;
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sh:target [
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a sh:SPARQLTarget ;
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sh:prefixes ro-crate:sparqlPrefixes ;
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sh:select """
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SELECT ?this
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WHERE {
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?this a schema:CreateAction ;
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schema:instrument ?instrument .
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?root schema:mainEntity ?instrument ;
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a schema:Dataset .
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?metadatafile schema:about ?root .
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FILTER(contains(str(?metadatafile), "ro-crate-metadata.json"))
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}
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"""
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] ;
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sh:rule [
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a sh:TripleRule ;
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sh:subject sh:this ;
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sh:predicate rdf:type ;
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sh:object ro-crate:WorkflowRun ;
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] .
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# Person who is the agent of a WorkflowRun SHOULD have an affiliation
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five-safes-crate:PersonAgentHasAffiliation
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a sh:NodeShape ;

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