varPro Phase 3: gg_udependent — dependency graph for uvarpro fits#86

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ehrlinger merged 16 commits into

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feat/varpro-phase3-gg-udependent

May 21, 2026

Commits on May 21, 2026

docs: add varPro Phase 3 (gg_udependent) design spec

ehrlinger
and
claude
committed
docs: add varPro Phase 3 (gg_udependent) implementation plan

ehrlinger
and
claude
committed
chore: open 2.7.3.9004 dev cycle; add ggraph to Suggests
ehrlinger
committed
feat(P3-T1): gg_udependent extractor + print/summary/autoplot (TDD)

ehrlinger
and
claude
committed
fix(P3-T1): threshold validation — any positive value is valid (not just (0,1))
ehrlinger
committed
fix(P3-T1): summary.gg_udependent returns invisibly without side-effect print
ehrlinger
committed
refactor(P3-T1): move S3 companions to shared method files; document igraph usage and degree semantics

ehrlinger
and
claude
committed
feat(P3-T2): plot.gg_udependent ggraph network renderer (TDD)

ehrlinger
and
claude
committed
fix(P3-T2): add importFrom igraph; use match for edge-weight backfill
ehrlinger
committed
test(P3-T3): add vdiffr snapshot test stubs (ggraph not in dev env)
ehrlinger
committed
docs(P3-T4): update NEWS.md for v2.7.3.9004 / gg_udependent Phase 3

ehrlinger
and
claude
committed
fix(P3-T4): move igraph to Imports, guard donttest example, prune stale snapshots

ehrlinger
and
claude
committed
chore(P3): remove dead requireNamespace(igraph) guard — igraph now in Imports
ehrlinger
committed
fix: CI failures — lint, vdiffr guard, undirected mode

ehrlinger
and
claude
committed
fix: add gg_udependent and plot.gg_udependent to _pkgdown.yml index

ehrlinger
and
claude
committed
fix: address Copilot review — undirected symmetry, summary API, print guard, snapshots

ehrlinger
and
claude
committed

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varPro Phase 3: gg_udependent — dependency graph for uvarpro fits#86

varPro Phase 3: gg_udependent — dependency graph for uvarpro fits#86
ehrlinger merged 16 commits into
mainfrom
feat/varpro-phase3-gg-udependent

Commits on May 21, 2026

docs: add varPro Phase 3 (gg_udependent) design spec

docs: add varPro Phase 3 (gg_udependent) implementation plan

chore: open 2.7.3.9004 dev cycle; add ggraph to Suggests

feat(P3-T1): gg_udependent extractor + print/summary/autoplot (TDD)

fix(P3-T1): threshold validation — any positive value is valid (not just (0,1))

fix(P3-T1): summary.gg_udependent returns invisibly without side-effect print

refactor(P3-T1): move S3 companions to shared method files; document igraph usage and degree semantics

feat(P3-T2): plot.gg_udependent ggraph network renderer (TDD)

fix(P3-T2): add importFrom igraph; use match for edge-weight backfill

test(P3-T3): add vdiffr snapshot test stubs (ggraph not in dev env)

docs(P3-T4): update NEWS.md for v2.7.3.9004 / gg_udependent Phase 3

fix(P3-T4): move igraph to Imports, guard donttest example, prune stale snapshots

chore(P3): remove dead requireNamespace(igraph) guard — igraph now in Imports

fix: CI failures — lint, vdiffr guard, undirected mode

fix: add gg_udependent and plot.gg_udependent to _pkgdown.yml index

fix: address Copilot review — undirected symmetry, summary API, print guard, snapshots