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Worktrees need bootstrap from origin/main

Trigger: Creating a fresh worktree (or having a subagent work in one) and tests immediately fail or outputs go missing.

Failure mode: A worktree branched off a diverged local tree inherits the divergence. A fresh worktree lacks env files, hook shims, and generated clients/builds, so tests fail for environmental reasons. Subagents resolve relative paths against the MAIN checkout, so their outputs land in the wrong tree.

Correct behavior:

  • Create worktrees off origin/main when local has diverged.
  • Bootstrap the worktree before running tests: env files, hook shims, regenerated clients/builds.
  • Pass subagents ABSOLUTE worktree paths, never relative ones.
  • Verify outputs actually landed in the worktree, not the main checkout.

Check: Does a clean test run pass in the worktree, and are new files physically inside it?

Seen in: recurring across multiple production projects.