reorder chapters

Author: fabridamicelli

book/_quarto.yml

@@ -36,7 +36,6 @@ book:
     - 01_2_executing_code.ipynb
     - 02_types_data_structures.ipynb
     - 03_1_flow_control.ipynb
-    - 03_2_error_handling.ipynb
     - 04_functions.ipynb
     # - 041_scope.ipynb
     - 05_comprehensions.ipynb
@@ -49,11 +48,12 @@ book:
     - 08_numpy.ipynb
     - 081_pandas.ipynb
     - 09_plotting.ipynb
-    - 10_testing.ipynb
     - lab_explore_data.ipynb
     - 11_cli.ipynb
-    - 13_tools.ipynb
+    - 03_2_error_handling.ipynb
     - 051_oop.ipynb
+    - 10_testing.ipynb
+    - 13_tools.ipynb
     - notebook_workflow.ipynb
     - 999_glossary.ipynb
     - references.qmd

book/lab_explore_data.ipynb

@@ -36,7 +36,9 @@
     "### Install `git-annex`\n",
     "The files with the actual data are not there, but we have the references to them so that we can pull them down.\n",
     "We will need the tool [git-annex tool](https://git-annex.branchable.com/install/).\n",
-    "\n",
+    "```bash\n",
+    "uv tool install git-annex\n",
+    "```\n",
     "\n",
     "### Pull the data\n",
     "Open a terminal inside `ds005420` and run:\n",
@@ -156,36 +158,20 @@
     "5) Adapt [this example](https://seaborn.pydata.org/examples/pointplot_anova.html) to plot a comparison between channels/subjects/time."
    ]
   },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "id": "14452053-710d-4c46-9d9a-ee075692ec7b",
-   "metadata": {},
-   "outputs": [],
-   "source": []
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "id": "ce196df5-f404-448a-88cd-1b164a2aafdf",
-   "metadata": {},
-   "outputs": [],
-   "source": []
-  },
   {
    "cell_type": "markdown",
    "id": "503eef31-86a5-41c9-8cd0-246ab18b4a2d",
    "metadata": {},
    "source": [
     "## Consolidate pipeline\n",
     "\n",
-    "Let's consolidate our workflow into a pipeline.\n",
+    "Let's consolidate our workflow into a pipeline to:\n",
     "\n",
-    "- read and assert subfolders\n",
-    "- clean column names\n",
-    "- standarize values\n",
-    "- plot correlations\n",
-    "- run tests"
+    "- Read and assert subfolders\n",
+    "- Clean column names\n",
+    "- Standarize values\n",
+    "- Plot and save correlations\n",
+    "- Run tests"
    ]
   }
  ],