Merge branch 'master' of github.com:florisvb/PyNumDiff into kalman-docstrings-and-doublecheck

Author: pavelkomarov

.editorconfig

@@ -0,0 +1,6 @@
+root = true
+
+[*.py]
+indent_style = tab
+indent_size = 4
+trim_trailing_whitespace = true

pynumdiff/__init__.py

@@ -1,12 +1,11 @@
-"""
-Import useful functions from all modules
+"""Import useful functions from all modules
 """
 from pynumdiff._version import __version__
 from pynumdiff.finite_difference import first_order, second_order
-from pynumdiff.smooth_finite_difference import mediandiff, meandiff, gaussiandiff, \
+from pynumdiff.smooth_finite_difference import mediandiff, meandiff, gaussiandiff,\
     friedrichsdiff, butterdiff, splinediff
-from pynumdiff.total_variation_regularization import *
-from pynumdiff.linear_model import *
-from pynumdiff.kalman_smooth import constant_velocity, constant_acceleration, constant_jerk, \
+from pynumdiff.total_variation_regularization import iterative_velocity, velocity,\
+    acceleration, jerk, smooth_acceleration, jerk_sliding
+from pynumdiff.linear_model import lineardiff, polydiff, spectraldiff, savgoldiff
+from pynumdiff.kalman_smooth import constant_velocity, constant_acceleration, constant_jerk,\
     known_dynamics
-

pynumdiff/finite_difference/_finite_difference.py

@@ -18,7 +18,7 @@ def first_order(x, dt, params=None, options={}, num_iterations=None):
              - **dxdt_hat** -- estimated derivative of x
     """
     if params != None and 'iterate' in options:
-        warn("""`params` and `options` parameters will be removed in a future version. Use `num_iterations` instead.""")
+        warn("""`params` and `options` parameters will be removed in a future version. Use `num_iterations` instead.""", DeprecationWarning)
         if isinstance(params, list): params = params[0]
         return _iterate_first_order(x, dt, params)
     elif num_iterations: