sam_bitwise_flag_filter.py - close file handle

Author: lecorguille

tools/sam_bitwise_flag_filter/sam_bitwise_flag_filter.py

@@ -142,6 +142,9 @@ def main():
             if valid_line:
                 print(line)
 
+    if options.input_sam:
+        infile.close()
+
 
 if __name__ == "__main__":
     main()