Search results

Update IEDB to use Next-Generation (NG) IEDB Tools API

Status: Open.

#1400 In griffithlab/pVACtools;

· susannasiebert opened on May 21, 2026

·  

8.0

Why the NetMHCpan and NetMHCpanEL algorithm output such different number of epitopes in filtered.tsv

Status: Open.

#1387 In griffithlab/pVACtools;

· ddzhang3 opened on Apr 28, 2026

Add NMD prediction support

Status: Open.

#1370 In griffithlab/pVACtools;

· mhoang22 opened on Mar 6, 2026

pVACview crashing/blanking out when uploading large metrics.json file (313MB+)

Status: Open.

#1365 In griffithlab/pVACtools;

· bioaman opened on Feb 10, 2026

Suggestion to use WhatsHap for phasing VCFs

Status: Open.

#1362 In griffithlab/pVACtools;

· jonng1000 opened on Jan 22, 2026

Investigate AEGIS for class II prediction

prediction_algorithms

Status: Open.

#1361 In griffithlab/pVACtools;

· malachig opened on Jan 16, 2026

Investigate MARIA for class II predictions

prediction_algorithms

Status: Open.

#1360 In griffithlab/pVACtools;

· malachig opened on Jan 16, 2026

Use tumor ploidy and cellularity estimates from FACETS and/or Sequenza for clonality assessment

feature addition

Status: Open.

#1355 In griffithlab/pVACtools;

· susannasiebert opened on Jan 5, 2026

TypeError: a bytes-like object is required, not 'NoneType'

bug report / hotfix PR

Status: Open.

#1347 In griffithlab/pVACtools;

· hwismer opened on Dec 9, 2025

Investigate adding pMHCchat as an additional binding prediction tool

prediction_algorithms

Status: Open.

#1269 In griffithlab/pVACtools;

· ksinghal28 opened on Jul 15, 2025

Allow filtering and sorting on the Acpt/Rev/Rej columns in pVACview

pVACview

Status: Open.

#1256 In griffithlab/pVACtools;

· susannasiebert opened on Jun 25, 2025

Add a command to create a colored ordering TXT/DOC file for DNA vectors

Status: Open.

#1251 In griffithlab/pVACtools;

· susannasiebert opened on Jun 18, 2025