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Clarify input list file format for ensembles
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docs/src/reference.md

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The input list file (specified by `general.input_list`) contains paths to all files required for each docking target. Files are automatically grouped into targets by a shared identifier derived from the filename: for molecule files, the identifier is the part of the filename before the configured `mol_suffixes` match; for restraints, topology/parameter, shape, and miscellaneous files, grouping typically uses the part before the first underscore.
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> **Important note about ensembles**: If your input contains multiple models, haddock will handle it with its own tooling. So here you should define it as a single model following the naming scheme, so:
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> **Important note about ensembles**: If your input contains multiple models, haddock will handle it with its own tooling. So here you should define it as a single molecule following the naming scheme, so:
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> ```
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> ❌ complexA_ens_l_u.pdb # containing 10 models

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