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USAID-DHS Post-Neonatal Mortality Predictors Project

This is the code repository for the USAID + DHS "MCH ML" project for predictors of child mortality at 1-59 months of age.

Code structure

  • config.yaml: The project configuration file, to be used with the versioning R package.
  • r-package/: This contains project functions structured as an R package. You can load all package functions in your R session using devtools::load_all("/path/to/usaid-mch-ml/r-package/"), which will give access to the functions and their documentation (via help(function_name))
  • data-prep/: Scripts used to prepare the data used for analysis. Saved to the "prepared_data" folder in the config.
  • run-model/: Scripts used to run the machine learning models and visualize model results. Saved to the "model_results" folder in the config.
  • exploratory/: Scripts used for one-off testing and simple use cases.

Useful links

Data access:

Methods: