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Expand file tree Collapse file tree Original file line number Diff line number Diff line change 1+ cff-version : 1.2.0
2+ title : " SimPlot-CL"
3+ message : " If you use SimPlot-CL in your research, please cite it using the metadata below."
4+ type : software
5+
6+ authors :
7+ - family-names : " Strotjohann"
8+ given-names : " Keno"
9+ orcid : " https://orcid.org/0009-0003-3675-3039"
10+ affiliation :
11+ - " Swiss Tropical and Public Health Institute"
12+ - " University of Basel"
13+ - " Swiss Institute of Bioinformatics"
14+ - family-names : " Hodcroft"
15+ given-names : " Emma B"
16+ orcid : " https://orcid.org/0000-0002-0078-2212"
17+ affiliation :
18+ - " Swiss Tropical and Public Health Institute"
19+ - " University of Basel"
20+ - " Swiss Institute of Bioinformatics"
21+
22+ repository-code : " https://github.com/hodcroftlab/simplot-cl"
23+ url : " https://github.com/hodcroftlab/simplot-cl"
24+
25+ version : " 1.0.0"
26+ date-released : 2026-02-26
27+
28+ license : " AGPL-3.0-only"
29+
30+ keywords :
31+ - bioinformatics
32+ - viral genomics
33+ - recombination
34+ - similarity plot
35+ - sequence analysis
36+ - command-line tool
37+
38+ abstract : >
39+ SimPlot-CL is a lightweight, Python-based command-line tool for generating
40+ similarity plots (SimPlots) from nucleotide sequences.
41+ It enables automated, reproducible sliding-window similarity analysis
42+ for viral genomics.
43+
44+ identifiers :
45+ - type : doi
46+ value : 10.5281/zenodo.18863590
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