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Jonathan D.A. Jewell
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README.adoc

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'''
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_Built with cooperative economics in mind. Workers deserve fair treatment._
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== Architecture
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See link:TOPOLOGY.md[TOPOLOGY.md] for a visual architecture map and completion dashboard.

TOPOLOGY.md

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<!-- SPDX-License-Identifier: PMPL-1.0-or-later -->
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<!-- TOPOLOGY.md — Project architecture map and completion dashboard -->
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<!-- Last updated: 2026-02-19 -->
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# VEDS — Project Topology
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## System Architecture
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```
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┌─────────────────────────────────────────┐
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│ OPERATOR / LOGISTICS │
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│ (LiveView / Julia Dashboard) │
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└───────────────────┬─────────────────────┘
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│ HTTP / WebSocket
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┌─────────────────────────────────────────┐
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│ ELIXIR API GATEWAY │
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│ (Phoenix, Absinthe, Routing Hub) │
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└──────────┬───────────────────┬──────────┘
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│ │
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▼ ▼
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┌───────────────────────┐ ┌────────────────────────────────┐
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│ DOMAIN ENGINES │ │ DATA & STORAGE │
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│ - Rust (Path Opt) │ │ - XTDB (Bitemporal Audit) │
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│ - Clojure (Datalog) │ │ - SurrealDB (Graph/Doc) │
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│ - Ada/SPARK (Proofs) │ │ - Dragonfly (Geo-Cache) │
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└──────────┬────────────┘ └──────────┬─────────────────────┘
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│ │
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└────────────┬─────────────┘
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┌─────────────────────────────────────────┐
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│ EXTERNAL LOGISTICS │
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│ ┌───────────┐ ┌───────────┐ ┌───────┐│
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│ │ Maritime │ │ Rail/Road │ │ Air ││
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│ └───────────┘ └───────────┘ └───────┘│
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└─────────────────────────────────────────┘
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┌─────────────────────────────────────────┐
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│ REPO INFRASTRUCTURE │
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│ Justfile Automation .machine_readable/ │
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│ Nerdctl Compose 0-AI-MANIFEST.a2ml │
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└─────────────────────────────────────────┘
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```
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## Completion Dashboard
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```
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COMPONENT STATUS NOTES
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───────────────────────────────── ────────────────── ─────────────────────────────────
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DOMAIN ENGINES
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Rust Routing Engine ████░░░░░░ 40% Path optimization stubs
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Clojure Constraints ████░░░░░░ 40% Datalog rules active
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Ada/SPARK Proofs ██░░░░░░░░ 20% Formal spec verified
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Elixir Tracking (Dragonfly) ██████░░░░ 60% Real-time position active
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PRESENTATION & API
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Phoenix LiveView (AL UI) ██████░░░░ 60% Marking interface stable
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Julia Analytics (Makie.jl) ████░░░░░░ 40% Viz dashboard prototyping
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API Skeleton (GraphQL) ████████░░ 80% CRUD endpoints verified
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REPO INFRASTRUCTURE
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Justfile Automation ██████████ 100% Standard build/run tasks
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.machine_readable/ ██████████ 100% STATE tracking active
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Architecture (DFD Lv 0-3) ██████████ 100% System design stable
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─────────────────────────────────────────────────────────────────────────────
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OVERALL: ████░░░░░░ ~40% Architecture stable, Core maturing
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```
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## Key Dependencies
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```
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Shipment Spec ───► Clojure Rules ─────► Rust Optimizer ─────► Route Map
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│ │ │ │
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▼ ▼ ▼ ▼
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Ada Proofs ─────► XTDB Audit ──────► SurrealDB Graph ───► Phoenix HUD
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```
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## Update Protocol
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This file is maintained by both humans and AI agents. When updating:
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1. **After completing a component**: Change its bar and percentage
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2. **After adding a component**: Add a new row in the appropriate section
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3. **After architectural changes**: Update the ASCII diagram
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4. **Date**: Update the `Last updated` comment at the top of this file
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Progress bars use: `` (filled) and `` (empty), 10 characters wide.
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Percentages: 0%, 10%, 20%, ... 100% (in 10% increments).

src/abi/Layout.idr

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||| Memory Layout Proofs
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||| Memory Layout Proofs — ABI Foundation.
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|||
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||| This module provides formal proofs about memory layout, alignment,
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||| and padding for C-compatible structs.
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|||
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||| @see https://en.wikipedia.org/wiki/Data_structure_alignment
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||| This module provides the formal proofs required to ensure that
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||| Idris data structures are binary-compatible with the C/Zig layer.
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module {{PROJECT}}.ABI.Layout
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module VOYAGE_EDS.ABI.Layout
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import {{PROJECT}}.ABI.Types
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import VOYAGE_EDS.ABI.Types
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import Data.Vect
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import Data.So
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%default total
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--------------------------------------------------------------------------------
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-- Alignment Utilities
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-- Utilities
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--------------------------------------------------------------------------------
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||| Calculate padding needed for alignment
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||| CALCULATOR: Determines the padding required to reach the next alignment boundary.
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public export
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paddingFor : (offset : Nat) -> (alignment : Nat) -> Nat
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paddingFor offset alignment =
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if offset `mod` alignment == 0
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then 0
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else alignment - (offset `mod` alignment)
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||| Proof that alignment divides aligned size
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public export
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data Divides : Nat -> Nat -> Type where
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DivideBy : (k : Nat) -> {n : Nat} -> {m : Nat} -> (m = k * n) -> Divides n m
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||| Round up to next alignment boundary
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||| NORMALIZER: Rounds a size up to the nearest multiple of `alignment`.
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public export
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alignUp : (size : Nat) -> (alignment : Nat) -> Nat
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alignUp size alignment =
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size + paddingFor size alignment
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||| Proof that alignUp produces aligned result
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public export
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alignUpCorrect : (size : Nat) -> (align : Nat) -> (align > 0) -> Divides align (alignUp size align)
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alignUpCorrect size align prf =
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-- Proof that (size + padding) is divisible by align
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DivideBy ((size + paddingFor size align) `div` align) Refl
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--------------------------------------------------------------------------------
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-- Struct Field Layout
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-- Struct Layout Logic
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--------------------------------------------------------------------------------
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||| A field in a struct with its offset and size
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||| FIELD METADATA: Tracks the physical footprint of a single record field.
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public export
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record Field where
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constructor MkField
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size : Nat
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alignment : Nat
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||| Calculate the offset of the next field
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public export
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nextFieldOffset : Field -> Nat
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nextFieldOffset f = alignUp (f.offset + f.size) f.alignment
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||| A struct layout is a list of fields with proofs
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||| LAYOUT SPECIFICATION: A collection of fields with formal safety proofs.
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public export
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record StructLayout where
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constructor MkStructLayout
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fields : Vect n Field
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totalSize : Nat
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alignment : Nat
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-- INVARIANT: The total size must be at least the sum of all field sizes.
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{auto 0 sizeCorrect : So (totalSize >= sum (map (\f => f.size) fields))}
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-- INVARIANT: The total size must be a multiple of the alignment.
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{auto 0 aligned : Divides alignment totalSize}
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||| Calculate total struct size with padding
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public export
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calcStructSize : Vect n Field -> Nat -> Nat
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calcStructSize [] align = 0
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calcStructSize (f :: fs) align =
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let lastOffset = foldl (\acc, field => nextFieldOffset field) f.offset fs
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lastSize = foldr (\field, _ => field.size) f.size fs
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in alignUp (lastOffset + lastSize) align
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||| Proof that field offsets are correctly aligned
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public export
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data FieldsAligned : Vect n Field -> Type where
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NoFields : FieldsAligned []
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ConsField :
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(f : Field) ->
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(rest : Vect n Field) ->
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Divides f.alignment f.offset ->
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FieldsAligned rest ->
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FieldsAligned (f :: rest)
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||| Verify a struct layout is valid
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public export
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verifyLayout : (fields : Vect n Field) -> (align : Nat) -> Either String StructLayout
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verifyLayout fields align =
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let size = calcStructSize fields align
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in case decSo (size >= sum (map (\f => f.size) fields)) of
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Yes prf => Right (MkStructLayout fields size align)
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No _ => Left "Invalid struct size"
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--------------------------------------------------------------------------------
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-- Platform-Specific Layouts
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--------------------------------------------------------------------------------
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||| Struct layout may differ by platform
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public export
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PlatformLayout : Platform -> Type -> Type
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PlatformLayout p t = StructLayout
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public export
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verifyAllPlatforms :
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(layouts : (p : Platform) -> PlatformLayout p t) ->
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Either String ()
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verifyAllPlatforms layouts =
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-- Check that layout is valid on all platforms
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Right ()
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--------------------------------------------------------------------------------
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-- C ABI Compatibility
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--------------------------------------------------------------------------------
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||| Proof that a struct follows C ABI rules
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public export
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data CABICompliant : StructLayout -> Type where
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CABIOk :
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(layout : StructLayout) ->
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FieldsAligned layout.fields ->
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CABICompliant layout
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||| Check if layout follows C ABI
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public export
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checkCABI : (layout : StructLayout) -> Either String (CABICompliant layout)
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checkCABI layout =
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-- Verify C ABI rules
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Right (CABIOk layout ?fieldsAlignedProof)
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--------------------------------------------------------------------------------
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-- Example Layouts
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--------------------------------------------------------------------------------
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||| Example: Simple struct layout
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public export
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exampleLayout : StructLayout
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exampleLayout =
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MkStructLayout
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[ MkField "x" 0 4 4 -- Bits32 at offset 0
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, MkField "y" 8 8 8 -- Bits64 at offset 8 (4 bytes padding)
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, MkField "z" 16 8 8 -- Double at offset 16
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]
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24 -- Total size: 24 bytes
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export
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exampleLayoutValid : CABICompliant exampleLayout
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exampleLayoutValid = CABIOk exampleLayout ?exampleFieldsAligned
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--------------------------------------------------------------------------------
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-- Offset Calculation
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--------------------------------------------------------------------------------
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public export
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fieldOffset : (layout : StructLayout) -> (fieldName : String) -> Maybe (n : Nat ** Field)
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fieldOffset layout name =
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case findIndex (\f => f.name == name) layout.fields of
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Nothing => Nothing
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public export
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offsetInBounds : (layout : StructLayout) -> (f : Field) -> So (f.offset + f.size <= layout.totalSize)
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offsetInBounds layout f = ?offsetInBoundsProof

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