forked from deepmodeling/deepmd-kit
-
Notifications
You must be signed in to change notification settings - Fork 7
Expand file tree
/
Copy pathc_api.h
More file actions
2349 lines (2210 loc) · 96 KB
/
c_api.h
File metadata and controls
2349 lines (2210 loc) · 96 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
// SPDX-License-Identifier: LGPL-3.0-or-later
#pragma once
#ifdef __cplusplus
extern "C" {
#else
// for C99
#include <stdbool.h>
#endif
/** @file */
/** C API version. Bumped whenever the API is changed.
* @since API version 22
*/
#define DP_C_API_VERSION 26
/**
* @brief Neighbor list.
*/
typedef struct DP_Nlist DP_Nlist;
/**
* @brief Create a new neighbor list.
* @param[in] inum_ Number of core region atoms
* @param[in] Array stores the core region atom's index
* @param[in] Array stores the core region atom's neighbor atom number
* @param[in] Array stores the core region atom's neighbor index
* @returns A pointer to the neighbor list.
**/
extern DP_Nlist* DP_NewNlist(int inum_,
int* ilist_,
int* numneigh_,
int** firstneigh_);
/**
* @brief Create a new neighbor list with communication capabilities.
* @details This function extends DP_NewNlist by adding support for parallel
* communication, allowing the neighbor list to be used in distributed
* environments.
* @param[in] inum_ Number of core region atoms.
* @param[in] ilist_ Array storing the core region atom's index.
* @param[in] numneigh_ Array storing the core region atom's neighbor atom
* number.
* @param[in] firstneigh_ Array storing the core region atom's neighbor index.
* @param[in] nswap Number of swaps to be performed in communication.
* @param[in] sendnum Array storing the number of atoms to send for each swap.
* @param[in] recvnum Array storing the number of atoms to receive for each
* swap.
* @param[in] firstrecv Index of the first receive operation for each swap.
* @param[in] sendlist List of atoms to be sent for each swap.
* @param[in] sendproc Array of processor IDs to send atoms to for each swap.
* @param[in] recvproc Array of processor IDs from which atoms are received for
* each swap.
* @param[in] world Pointer to the MPI communicator or similar communication
* world used for the operation.
* @returns A pointer to the initialized neighbor list with communication
* capabilities.
*/
extern DP_Nlist* DP_NewNlist_comm(int inum_,
int* ilist_,
int* numneigh_,
int** firstneigh_,
int nswap,
int* sendnum,
int* recvnum,
int* firstrecv,
int** sendlist,
int* sendproc,
int* recvproc,
void* world);
/**
* @brief Set mask for a neighbor list.
*
* @param nl Neighbor list.
* @param mask mask.
* @since API version 23
*
**/
extern void DP_NlistSetMask(DP_Nlist* nl, int mask);
/**
* @brief Set mapping for a neighbor list.
*
* @param nl Neighbor list.
* @param mapping mapping from all atoms to real atoms, in size nall.
* @since API version 25
*
**/
extern void DP_NlistSetMapping(DP_Nlist* nl, int* mapping);
/**
* @brief Delete a neighbor list.
*
* @param nl Neighbor list to delete.
*
**/
extern void DP_DeleteNlist(DP_Nlist* nl);
/**
* @brief Check if there is any exceptions throw.
*
* @param dp The neighbor list to use.
* @return const char* error message.
*/
const char* DP_NlistCheckOK(DP_Nlist* dp);
/**
* @brief The deep potential base model.
* @since API version 24
**/
typedef struct DP_DeepBaseModel DP_DeepBaseModel;
/**
* @brief Delete a Deep Potential Base Model.
*
* @param dp Deep Potential Base Model to delete.
* @since API version 24
*/
extern void DP_DeleteDeepBaseModel(DP_DeepBaseModel* dp);
/**
* @brief The deep potential base model deviation.
* @since API version 24
**/
typedef struct DP_DeepBaseModelDevi DP_DeepBaseModelDevi;
/**
* @brief Delete a Deep Potential Base Model Deviation.
*
* @param dp Deep Potential Base Model Deviation to delete.
* @since API version 24
*/
extern void DP_DeleteDeepBaseModelDevi(DP_DeepBaseModelDevi* dp);
/**
* @brief The deep potential.
**/
typedef struct DP_DeepPot DP_DeepPot;
/**
* @brief DP constructor with initialization.
* @param[in] c_model The name of the frozen model file.
* @returns A pointer to the deep potential.
**/
extern DP_DeepPot* DP_NewDeepPot(const char* c_model);
/**
* @brief DP constructor with initialization.
*
* @param c_model The name of the frozen model file.
* @param gpu_rank The rank of the GPU.
* @param c_file_content Broken implementation. Use
* DP_NewDeepPotWithParam2 instead.
* @return DP_DeepPot* A pointer to the deep potential.
*/
extern DP_DeepPot* DP_NewDeepPotWithParam(const char* c_model,
const int gpu_rank,
const char* c_file_content);
/**
* @brief DP constructor with initialization.
* @version 2
* @param c_model The name of the frozen model file.
* @param gpu_rank The rank of the GPU.
* @param c_file_content The content of the model file.
* @param size_file_content The size of the model file.
* @return DP_DeepPot* A pointer to the deep potential.
*/
extern DP_DeepPot* DP_NewDeepPotWithParam2(const char* c_model,
const int gpu_rank,
const char* c_file_content,
const int size_file_content);
/**
* @brief Delete a Deep Potential.
*
* @param dp Deep Potential to delete.
*/
extern void DP_DeleteDeepPot(DP_DeepPot* dp);
/**
* @brief The deep potential spin model.
* @since API version 24
**/
typedef struct DP_DeepSpin DP_DeepSpin;
/**
* @brief DP constructor with initialization.
* @param[in] c_model The name of the frozen model file.
* @returns A pointer to the deep potential spin model.
* @since API version 24
**/
extern DP_DeepSpin* DP_NewDeepSpin(const char* c_model);
/**
* @brief DP constructor with initialization.
* @version 2
* @param c_model The name of the frozen model file.
* @param gpu_rank The rank of the GPU.
* @param c_file_content The content of the model file.
* @param size_file_content The size of the model file.
* @return DP_DeepSpin* A pointer to the deep potential spin model.
* @since API version 24
*/
extern DP_DeepSpin* DP_NewDeepSpinWithParam2(const char* c_model,
const int gpu_rank,
const char* c_file_content,
const int size_file_content);
/**
* @brief Delete a Deep Potential Spin Model.
*
* @param dp Deep Potential Spin Model to delete.
* @since API version 24
*/
extern void DP_DeleteDeepSpin(DP_DeepSpin* dp);
// deprecated interface version1
/**
* @brief Evaluate the energy, force and virial by using a DP. (double version)
* @attention The number of frames is assumed to be 1.
* @param[in] dp The DP to use.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotCompute(DP_DeepPot* dp,
const int natom,
const double* coord,
const int* atype,
const double* cell,
double* energy,
double* force,
double* virial,
double* atomic_energy,
double* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP. (float version)
* @attention The number of frames is assumed to be 1.
* @param[in] dp The DP to use.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotComputef(DP_DeepPot* dp,
const int natom,
const float* coord,
const int* atype,
const float* cell,
double* energy,
float* force,
float* virial,
float* atomic_energy,
float* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP with the neighbor
*list. (double version)
* @attention The number of frames is assumed to be 1.
* @param[in] dp The DP to use.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] nghost The number of ghost atoms.
* @param[in] nlist The neighbor list.
* @param[in] ago Update the internal neighbour list if ago is 0.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotComputeNList(DP_DeepPot* dp,
const int natom,
const double* coord,
const int* atype,
const double* cell,
const int nghost,
const DP_Nlist* nlist,
const int ago,
double* energy,
double* force,
double* virial,
double* atomic_energy,
double* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP with the neighbor
*list. (float version)
* @attention The number of frames is assumed to be 1.
* @param[in] dp The DP to use.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] nghost The number of ghost atoms.
* @param[in] nlist The neighbor list.
* @param[in] ago Update the internal neighbour list if ago is 0.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotComputeNListf(DP_DeepPot* dp,
const int natom,
const float* coord,
const int* atype,
const float* cell,
const int nghost,
const DP_Nlist* nlist,
const int ago,
double* energy,
float* force,
float* virial,
float* atomic_energy,
float* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP. (double version)
* @version 2
* @param[in] dp The DP to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotCompute2(DP_DeepPot* dp,
const int nframes,
const int natom,
const double* coord,
const int* atype,
const double* cell,
const double* fparam,
const double* aparam,
double* energy,
double* force,
double* virial,
double* atomic_energy,
double* atomic_virial);
/**
* @brief Evaluate the energy, force, magnetic force and virial by using a DP
* spin model. (double version)
* @version 2
* @param[in] dp The DP spin model to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] spin The spins of atoms, [0, 0, 0] if no spin. The array should be
*of size nframes x natoms x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] force_mag Output magnetic force on each atom. The array should be
* of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
* @since API version 24
**/
extern void DP_DeepSpinCompute2(DP_DeepSpin* dp,
const int nframes,
const int natom,
const double* coord,
const double* spin,
const int* atype,
const double* cell,
const double* fparam,
const double* aparam,
double* energy,
double* force,
double* force_mag,
double* virial,
double* atomic_energy,
double* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP. (float version)
* @version 2
* @param[in] dp The DP to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotComputef2(DP_DeepPot* dp,
const int nframes,
const int natom,
const float* coord,
const int* atype,
const float* cell,
const float* fparam,
const float* aparam,
double* energy,
float* force,
float* virial,
float* atomic_energy,
float* atomic_virial);
/**
* @brief Evaluate the energy, force, magnetic force and virial by using a DP
* spin model. (float version)
* @version 2
* @param[in] dp The DP to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] spin The spins of atoms, [0, 0, 0] if no spin. The array should be
*of size nframes x natoms x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] force_mag Output magnetic force on each atom. The array should be
* of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
* @since API version 24
**/
extern void DP_DeepSpinComputef2(DP_DeepSpin* dp,
const int nframes,
const int natom,
const float* coord,
const float* spin,
const int* atype,
const float* cell,
const float* fparam,
const float* aparam,
double* energy,
float* force,
float* force_mag,
float* virial,
float* atomic_energy,
float* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP with the neighbor
*list. (double version)
* @version 2
* @param[in] dp The DP to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] nghost The number of ghost atoms.
* @param[in] nlist The neighbor list.
* @param[in] ago Update the internal neighbour list if ago is 0.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotComputeNList2(DP_DeepPot* dp,
const int nframes,
const int natom,
const double* coord,
const int* atype,
const double* cell,
const int nghost,
const DP_Nlist* nlist,
const int ago,
const double* fparam,
const double* aparam,
double* energy,
double* force,
double* virial,
double* atomic_energy,
double* atomic_virial);
/**
* @brief Evaluate the energy, force, magnetic force and virial by using a DP
*spin model with the neighbor list. (double version)
* @version 2
* @param[in] dp The DP spin model to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] spin The spins of atoms, [0, 0, 0] if no spin. The array should be
*of size nframes x natoms x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] nghost The number of ghost atoms.
* @param[in] nlist The neighbor list.
* @param[in] ago Update the internal neighbour list if ago is 0.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] force_mag Output magnetic force on each atom. The array should be
* of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
* @since API version 24
**/
extern void DP_DeepSpinComputeNList2(DP_DeepSpin* dp,
const int nframes,
const int natoms,
const double* coord,
const double* spin,
const int* atype,
const double* cell,
const int nghost,
const DP_Nlist* nlist,
const int ago,
const double* fparam,
const double* aparam,
double* energy,
double* force,
double* force_mag,
double* virial,
double* atomic_energy,
double* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP with the neighbor
*list. (float version)
* @version 2
* @param[in] dp The DP to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] nghost The number of ghost atoms.
* @param[in] nlist The neighbor list.
* @param[in] ago Update the internal neighbour list if ago is 0.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotComputeNListf2(DP_DeepPot* dp,
const int nframes,
const int natom,
const float* coord,
const int* atype,
const float* cell,
const int nghost,
const DP_Nlist* nlist,
const int ago,
const float* fparam,
const float* aparam,
double* energy,
float* force,
float* virial,
float* atomic_energy,
float* atomic_virial);
/**
* @brief Evaluate the energy, force, magnetic force and virial by using a DP
*spin model with the neighbor list. (float version)
* @version 2
* @param[in] dp The DP spin model to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] spin The spins of atoms, [0, 0, 0] if no spin. The array should be
*of size nframes x natoms x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] nghost The number of ghost atoms.
* @param[in] nlist The neighbor list.
* @param[in] ago Update the internal neighbour list if ago is 0.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] force_mag Output magnetic force on each atom. The array should be
* of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
* @since API version 24
**/
extern void DP_DeepSpinComputeNListf2(DP_DeepSpin* dp,
const int nframes,
const int natoms,
const float* coord,
const float* spin,
const int* atype,
const float* cell,
const int nghost,
const DP_Nlist* nlist,
const int ago,
const float* fparam,
const float* aparam,
double* energy,
float* force,
float* force_mag,
float* virial,
float* atomic_energy,
float* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP with the mixed
*type. (double version)
* @param[in] dp The DP to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain nframes x natoms
*ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotComputeMixedType(DP_DeepPot* dp,
const int nframes,
const int natoms,
const double* coord,
const int* atype,
const double* cell,
const double* fparam,
const double* aparam,
double* energy,
double* force,
double* virial,
double* atomic_energy,
double* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP with the mixed
*type. (float version)
* @param[in] dp The DP to use.
* @param[in] nframes The number of frames.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain nframes x natoms
*ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
* natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotComputeMixedTypef(DP_DeepPot* dp,
const int nframes,
const int natoms,
const float* coord,
const int* atype,
const float* cell,
const float* fparam,
const float* aparam,
double* energy,
float* force,
float* virial,
float* atomic_energy,
float* atomic_virial);
/**
* @brief The deep potential model deviation.
**/
typedef struct DP_DeepPotModelDevi DP_DeepPotModelDevi;
/**
* @brief DP model deviation constructor with initialization.
* @param[in] c_models The array of the name of the frozen model file.
* @param[in] nmodels The number of models.
**/
extern DP_DeepPotModelDevi* DP_NewDeepPotModelDevi(const char** c_models,
int n_models);
/**
* @brief DP model deviation constructor with initialization.
*
* @param[in] c_models The array of the name of the frozen model file.
* @param[in] nmodels The number of models.
* @param[in] gpu_rank The rank of the GPU.
* @param[in] c_file_contents The contents of the model file.
* @param[in] n_file_contents The number of the contents of the model file.
* @param[in] size_file_contents The sizes of the contents of the model file.
* @return DP_DeepPotModelDevi* A pointer to the deep potential model deviation.
*/
extern DP_DeepPotModelDevi* DP_NewDeepPotModelDeviWithParam(
const char** c_model,
const int n_models,
const int gpu_rank,
const char** c_file_contents,
const int n_file_contents,
const int* size_file_contents);
/**
* @brief Delete a Deep Potential Model Deviation.
*
* @param dp Deep Potential to delete.
*/
extern void DP_DeleteDeepPotModelDevi(DP_DeepPotModelDevi* dp);
/**
* @brief The deep potential spin model deviation.
* @since API version 24
**/
typedef struct DP_DeepSpinModelDevi DP_DeepSpinModelDevi;
/**
* @brief DP spin model deviation constructor with initialization.
* @param[in] c_models The array of the name of the frozen model file.
* @param[in] nmodels The number of models.
* @since API version 24
**/
extern DP_DeepSpinModelDevi* DP_NewDeepSpinModelDevi(const char** c_models,
int n_models);
/**
* @brief DP spin model deviation constructor with initialization.
*
* @param[in] c_models The array of the name of the frozen model file.
* @param[in] nmodels The number of models.
* @param[in] gpu_rank The rank of the GPU.
* @param[in] c_file_contents The contents of the model file.
* @param[in] n_file_contents The number of the contents of the model file.
* @param[in] size_file_contents The sizes of the contents of the model file.
* @return DP_DeepSpinModelDevi* A pointer to the deep potential model
* deviation.
* @since API version 24
*/
extern DP_DeepSpinModelDevi* DP_NewDeepSpinModelDeviWithParam(
const char** c_model,
const int n_models,
const int gpu_rank,
const char** c_file_contents,
const int n_file_contents,
const int* size_file_contents);
/**
* @brief Delete a Deep Potential Spin Model Deviation.
*
* @param dp Deep Potential Spin Model to delete.
* @since API version 24
*/
extern void DP_DeleteDeepSpinModelDevi(DP_DeepSpinModelDevi* dp);
// deprecated interface version1
/**
* @brief Evaluate the energy, force and virial by using a DP model deviation
*with neighbor list. (double version)
* @param[in] dp The DP model deviation to use.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotModelDeviCompute(DP_DeepPotModelDevi* dp,
const int natom,
const double* coord,
const int* atype,
const double* cell,
double* energy,
double* force,
double* virial,
double* atomic_energy,
double* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP model deviation
*with neighbor list. (float version)
* @param[in] dp The DP model deviation to use.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
extern void DP_DeepPotModelDeviComputef(DP_DeepPotModelDevi* dp,
const int natom,
const float* coord,
const int* atype,
const float* cell,
double* energy,
float* force,
float* virial,
float* atomic_energy,
float* atomic_virial);
/**
* @brief Evaluate the energy, force and virial by using a DP model deviation
*with neighbor list. (double version)
* @version 2
* @param[in] dp The DP model deviation to use.
* @param[in] nframes The number of frames. Only support 1 for now.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.
* @param[in] atype The atom types. The array should contain natoms ints.
* @param[in] box The cell of the region. The array should be of size 9. Pass
*NULL if pbc is not used.
* @param[in] fparam The frame parameters. The array can be of size nframes x
*dim_fparam.
* @param[in] aparam The atom parameters. The array can be of size nframes x
*natoms x dim_aparam.
* @param[out] energy Output energy.
* @param[out] force Output force. The array should be of size natoms x 3.
* @param[out] virial Output virial. The array should be of size 9.
* @param[out] atomic_energy Output atomic energy. The array should be of size
*natoms.
* @param[out] atomic_virial Output atomic virial. The array should be of size
*natoms x 9.
* @warning The output arrays should be allocated before calling this function.
*Pass NULL if not required.
**/
void DP_DeepPotModelDeviCompute2(DP_DeepPotModelDevi* dp,
const int nframes,
const int natoms,
const double* coord,
const int* atype,
const double* cell,
const double* fparam,
const double* aparam,
double* energy,
double* force,
double* virial,
double* atomic_energy,
double* atomic_virial);
/**
* @brief Evaluate the energy, force, magnetic force and virial by using a DP
* spin model deviation. (double version)
* @version 2
* @param[in] dp The DP spin model deviation to use.
* @param[in] nframes The number of frames. Only support 1 for now.
* @param[in] natoms The number of atoms.
* @param[in] coord The coordinates of atoms. The array should be of size natoms
*x 3.