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Remove redundant source folder parameter
1 parent 14934a0 commit ed87e58

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Lines changed: 3 additions & 5 deletions

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src/imcflibs/imagej/bioformats.py

Lines changed: 3 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -480,15 +480,13 @@ def get_metadata_from_file(path_to_image):
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return metadata
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def get_stage_coords(source, filenames):
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def get_stage_coords(filenames):
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"""Get stage coordinates and calibration for a given list of images.
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Parameters
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----------
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source : str
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Path to the images.
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filenames : list of str
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List of image filenames.
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List of image filepaths.
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Returns
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-------
@@ -518,7 +516,7 @@ def get_stage_coords(source, filenames):
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reader.setFlattenedResolutions(False)
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ome_meta = MetadataTools.createOMEXMLMetadata()
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reader.setMetadataStore(ome_meta)
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reader.setId(source + str(image))
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reader.setId(str(image))
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series_count = reader.getSeriesCount()
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# Process only the first image to get values not dependent on series

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