1010[ ![ DOI] ( https://zenodo.org/badge/156891364.svg )] [ doi ]
1111
1212This package contains a diverse collection of Python functions dealing with
13- paths, I/O (file handles, ...), strings etc. and tons of [ Fiji] [ fiji ] /
14- [ ImageJ2] [ imagej ] convenience wrappers to simplify scripting and reduce
15- cross-script redundanciees.
13+ paths, I/O (file handles, ...), strings etc. and tons of [ Fiji] / [ ImageJ2]
14+ convenience wrappers to simplify scripting and reduce cross-script redundancies.
1615
1716Initially this has been a multi-purpose package where a substantial part had
1817been useful in ** CPython** as well. However, since the latest Jython release is
@@ -25,8 +24,7 @@ Uni Basel`** [update site][imcf_updsite] to your ImageJ installation.
2524
2625The [ ` pip install ` able package] [ pypi ] is probably only useful for two cases:
2726running ` pytest ` (where applicable) and rendering [ HTML-based API docs] [ apidocs ]
28- using [ ` pdoc ` ] [ pdoc ] . Let us know in case you're having another use case 🎪 for
29- it.
27+ using [ pdoc] . Let us know in case you're having another use case 🎪 for it.
3028
3129Developed and provided by the [ Imaging Core Facility (IMCF)] [ imcf ] of the
3230Biozentrum, University of Basel, Switzerland.
@@ -96,7 +94,7 @@ correct_and_project(raw_image, out_path, model, "Maximum", ".ics")
9694* See the [ FluoView_OIF_OIB_OIR_Simple_Stitcher.py] [ script_fvstitch ] script.
9795
9896[ imcf ] : https://www.biozentrum.unibas.ch/imcf
99- [ imagej ] : https://imagej.net
97+ [ imagej2 ] : https://imagej.net
10098[ fiji ] : https://fiji.sc
10199[ jython3 ] : https://www.jython.org/jython-3-roadmap
102100[ sj_maven ] : https://maven.scijava.org/#nexus-search;gav~ch.unibas.biozentrum.imcf~~~~
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