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fix ggrastr version
1 parent 9c8e229 commit 7f41b57

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Lines changed: 2 additions & 3 deletions

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README.md

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@@ -65,7 +65,7 @@ R -q -e 'if(!require(devtools)) install.packages("devtools",repos = "http://cran
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R -q -e 'if(!require(Cairo)) devtools::install_version("Cairo",version="1.5-12",repos = "http://cran.us.r-project.org")'
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R -q -e 'if(!require(foreign)) devtools::install_version("foreign",version="0.8-76",repos = "http://cran.us.r-project.org")'
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R -q -e 'if(!require(ggpubr)) devtools::install_version("ggpubr",version="0.3.0",repos = "http://cran.us.r-project.org")'
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R -q -e 'if(!require(ggrastr)) devtools::install_version("ggrastr",version="0.1.9",repos = "http://cran.us.r-project.org")'
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R -q -e 'if(!require(ggrastr)) devtools::install_version("ggrastr",version="0.2.1",repos = "http://cran.us.r-project.org")'
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R -q -e 'if(!require(arrow)) devtools::install_version("arrow",version="2.0.0",repos = "http://cran.us.r-project.org")'
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R -q -e 'if(!require(Seurat)) devtools::install_version("Seurat",version="3.2.3",repos = "http://cran.us.r-project.org")'
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R -q -e 'if(!require(rmarkdown)) devtools::install_version("rmarkdown",version="2.5",repos = "http://cran.us.r-project.org")'

install_VIPlight.sh

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@@ -1,8 +1,7 @@
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#!/usr/bin/env bash
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# CLT will not be available for this installation
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# Please provide the destnation conda env path (--prefix)
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#appPATH="./VIPlight"
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appPATH="/mnt/depts/dept04/compbio/edge_condaEnv/VIPlight"
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appPATH="./VIPlight"
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set -e
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exePath=$(readlink -e $(dirname $0))

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