recommit

Author: ischlo

DESCRIPTION

@@ -13,6 +13,7 @@ Description: This package builds on top of the RcppArmadillo linear
     and destinations. It aims at implementing an easy approach based on
     matrices. Currently, the simplest form of production, destination and
     doubly constrained models are implemented.
+Date: 2024-12-10
 License: MIT + file LICENSE
 URL: https://ischlo.github.io/cppSim/, https://github.com/ischlo/cppSim
 Depends:

README.Rmd

@@ -1,6 +1,6 @@
 ---
 output: github_document
-bibliography: references.bib
+# bibliography: references.bib
 ---
 
 ------------------------------------------------------------------------
@@ -104,4 +104,13 @@ print(bench)
 
 ```
 
-## References
+## Citation 
+
+```{r eval=TRUE,echo=FALSE,include=TRUE}
+
+citation("cppSim")
+
+```
+
+
+<!-- ## References -->

README.md

@@ -101,37 +101,33 @@ installed.
 
 ### Other
 
-On the R side, it uses `Rcpp` (Eddelbuettel and François 2011) and
-`RcppArmadillo` (Eddelbuettel and Sanderson 2014).
+On the R side, it uses `Rcpp` \[@eddelbuettel2011\] and `RcppArmadillo`
+\[@eddelbuettel2014\].
 
 ## Performance
 
 Compared to the equivalent functions implemented in pure R, it runs
 about x10 faster for a $\sim 1000\times 1000$ OD matrix, the speed up is
 increasingly more significant as matrices get bigger.
 
-    #> [1] ""
-
-## References
-
-<div id="refs" class="references csl-bib-body hanging-indent"
-entry-spacing="0">
-
-<div id="ref-eddelbuettel2011" class="csl-entry">
-
-Eddelbuettel, Dirk, and Romain François. 2011. “**Rcpp** : Seamless *R*
-and *C++* Integration.” *Journal of Statistical Software* 40 (8).
-<https://doi.org/10.18637/jss.v040.i08>.
-
-</div>
-
-<div id="ref-eddelbuettel2014" class="csl-entry">
-
-Eddelbuettel, Dirk, and Conrad Sanderson. 2014. “RcppArmadillo:
-Accelerating R with High-Performance C++ Linear Algebra.” *Computational
-Statistics & Data Analysis* 71: 1054–63.
-<https://doi.org/10.1016/j.csda.2013.02.005>.
-
-</div>
-
-</div>
+    #> [1] "/Users/cenv1069/Library/R/arm64/4.4/library/cppSim/extdata/benchmark_test.rds"
+
+## Citation
+
+    #> To cite package 'cppSim' in publications use:
+    #> 
+    #>   Schlosser I (2024). _cppSim: Fast and Memory Efficient Spatial
+    #>   Interaction Models_. R package version 0.2,
+    #>   https://github.com/ischlo/cppSim, <https://ischlo.github.io/cppSim/>.
+    #> 
+    #> A BibTeX entry for LaTeX users is
+    #> 
+    #>   @Manual{,
+    #>     title = {cppSim: Fast and Memory Efficient Spatial Interaction Models},
+    #>     author = {Ivann Schlosser},
+    #>     year = {2024},
+    #>     note = {R package version 0.2, https://github.com/ischlo/cppSim},
+    #>     url = {https://ischlo.github.io/cppSim/},
+    #>   }
+
+<!-- ## References -->

vignettes/gravity_model.Rmd

@@ -130,7 +130,7 @@ e_sorensen <- function(data, fit) {
 
 
 
-```{r load_data}
+```{r load_data, echo=FALSE}
 
 flows_matrix <- list.load("flows_matrix.rds")