Ignore local analysis and generated tutorial data

Author: jaydu1

.gitignore

@@ -1,6 +1,9 @@
 # Planning documents
 plan/
 
+# Local Codex project guidance
+/AGENTS.md
+
 # Byte-compiled / optimized / DLL files
 __pycache__/
 *.py[cod]
@@ -170,11 +173,15 @@ cython_debug/
 tests/benchmark_adamson.py
 
 causarray/___*.py
-/docs/source/tutorial/adamson
+
+# Adamson tutorial is currently a local analysis and is not part of the
+# committed documentation.
+/docs/source/tutorial/adamson/
 
 # Replogle tutorial: large data files (regenerate with prep_tutorial_data.py or
 # download from the project data repository; replogle_subset.h5ad is ~2 GB)
 docs/source/tutorial/replogle/replogle_subset.h5ad
+docs/source/tutorial/replogle/replogle_subset_norm*.h5ad
 docs/source/tutorial/replogle/replogle_normed.h5ad
 docs/source/tutorial/replogle/replogle_results.h5