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.github/ISSUE_TEMPLATE/feature_request.md

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---
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name: Feature request
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about: Suggest an idea for this project
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about: Suggest an idea for this projectt
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title: ''
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labels: ''
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assignees: ''

.github/workflows/maven_build.yml

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# This workflow will build a Java project with Maven
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# This workflow will build a Java projectt with Maven
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# For more information see: https://help.github.com/actions/language-and-framework-guides/building-and-testing-java-with-maven
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name: build

.github/workflows/maven_test.yml

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# This workflow will build a Java project with Maven
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# This workflow will build a Java projectt with Maven
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# For more information see: https://help.github.com/actions/language-and-framework-guides/building-and-testing-java-with-maven
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name: test

CODE_OF_CONDUCT.md

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## Our Pledge
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In the interest of fostering an open and welcoming environment, we as
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contributors and maintainers pledge to making participation in our project and
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contributors and maintainers pledge to making participation in our projectt and
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our community a harassment-free experience for everyone, regardless of age, body
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size, disability, ethnicity, sex characteristics, gender identity and expression,
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level of experience, education, socio-economic status, nationality, personal
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## Our Responsibilities
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Project maintainers are responsible for clarifying the standards of acceptable
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projectt maintainers are responsible for clarifying the standards of acceptable
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behavior and are expected to take appropriate and fair corrective action in
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response to any instances of unacceptable behavior.
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Project maintainers have the right and responsibility to remove, edit, or
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projectt maintainers have the right and responsibility to remove, edit, or
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reject comments, commits, code, wiki edits, issues, and other contributions
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that are not aligned to this Code of Conduct, or to ban temporarily or
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permanently any contributor for other behaviors that they deem inappropriate,
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threatening, offensive, or harmful.
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## Scope
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This Code of Conduct applies both within project spaces and in public spaces
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when an individual is representing the project or its community. Examples of
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representing a project or community include using an official project e-mail
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This Code of Conduct applies both within projectt spaces and in public spaces
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when an individual is representing the projectt or its community. Examples of
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representing a projectt or community include using an official projectt e-mail
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address, posting via an official social media account, or acting as an appointed
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representative at an online or offline event. Representation of a project may be
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further defined and clarified by project maintainers.
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representative at an online or offline event. Representation of a projectt may be
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further defined and clarified by projectt maintainers.
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## Enforcement
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Instances of abusive, harassing, or otherwise unacceptable behavior may be
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reported by contacting the project team at mhsatman@gmail.com. All
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reported by contacting the projectt team at mhsatman@gmail.com. All
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complaints will be reviewed and investigated and will result in a response that
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is deemed necessary and appropriate to the circumstances. The project team is
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is deemed necessary and appropriate to the circumstances. The projectt team is
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obligated to maintain confidentiality with regard to the reporter of an incident.
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Further details of specific enforcement policies may be posted separately.
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Project maintainers who do not follow or enforce the Code of Conduct in good
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projectt maintainers who do not follow or enforce the Code of Conduct in good
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faith may face temporary or permanent repercussions as determined by other
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members of the project's leadership.
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members of the projectt's leadership.
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## Attribution
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CONTRIBUTING.md

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# Welcome!
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Our contributers are mainly RCaller users in academia or software sector. They used to integrate RCaller in their projects and they contributed to the project
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Our contributors are mainly RCaller users in academia or software sector. They used to integrate RCaller in their projectts and they contributed to the projectt
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for supporting themself first and the whole users after. You can contribute by
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- sending pull requests (code is the king)
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- posting answers in stackoverflow.
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## Sending pull requests
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If you added some functionality, tests, or examples in the project, first create a fork in Github and make the contribution public in your repo.
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Then send a pull request as decribed in [Creating pull requests](https://docs.github.com/en/github/collaborating-with-issues-and-pull-requests/creating-a-pull-request).
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If you added some functionality, tests, or examples in the projectt, first create a fork in Github and make the contribution public in your repo.
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Then send a pull request as described in [Creating pull requests](https://docs.github.com/en/github/collaborating-with-issues-and-pull-requests/creating-a-pull-request).
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## Writing blogposts
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Many users have blogposts about RCaller. If you have one, tell us to be visible in this repo. Here is some blogposts:
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## Have problems?
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Please create an issue that adresses your problem. We will be happy to help to you.
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Please create an issue that addresses your problem. We will be happy to help to you.
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We are just here waiting to hear from you!

RCaller/settings.gradle

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rootProject.name = 'RCaller'
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rootprojectt.name = 'RCaller'

RCaller/src/main/java/com/github/rcaller/rstuff/RCallerOptions.java

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/**
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* Whether we should not use XML as backward behavior iif {@link #useArrowIfAvailable} is true but Arrow is not available
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* Whether we should not use XML as backward behavior if {@link #useArrowIfAvailable} is true but Arrow is not available
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*/
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public boolean failIfArrowNotAvailable() {
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return failIfArrowNotAvailable;

RCaller/src/main/java/com/github/rcaller/rstuff/RCode.java

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*/
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String toTryCatchScript(File errorOutputFile) {
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//Using code snippet "An improved “error handler”" with withCallingHandlers nested in tryCatch
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//from https://cran.r-project.org/web/packages/tryCatchLog/vignettes/tryCatchLog-intro.html
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//from https://cran.r-projectt.org/web/packages/tryCatchLog/vignettes/tryCatchLog-intro.html
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var script = new StringBuilder("tryCatch( withCallingHandlers({\n");
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script.append(this.code);

RCaller/src/main/java/com/github/rcaller/scriptengine/RCallerScriptEngine.java

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/*
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Methods for invokable interface
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Methods for invocable interface
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*/
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@Override
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public Object invokeMethod(Object o, String fname, Object... arguments) throws ScriptException, NoSuchMethodException {
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/*
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End of Methods for invokable interface
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End of Methods for invocable interface
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*/
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}

RCaller/src/main/java/com/github/rcaller/util/Globals.java

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public class Globals {
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public static String cranRepos = "http://cran.r-project.org";
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public static String cranRepos = "http://cran.r-projectt.org";
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public static String RScript_Windows = "C:\\Program Files\\R\\R-4.1.1\\bin\\Rscript.exe";
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public static String RScript_Linux = "/usr/bin/Rscript";
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public static String RScript_Mac = "/usr/local/bin/Rscript";
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if (!startingPath.isDirectory()) {
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throw new ExecutionException(startingPath.toString() + " is not a directory:");
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}
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File[] childs = startingPath.listFiles();
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File[] children = startingPath.listFiles();
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if (childs != null && childs.length > 0) {
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for (File child : childs) {
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if (children != null && children.length > 0) {
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for (File child : children) {
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if (child.isFile()) {
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return (child);

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